RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 NDUFAF7Q7L592 441 aa12.2□□□□□ -0.46
HDAC1-209ENST00000484305 CTAGE4Q8IX94 777 aa12.2□□□□□ -0.46
HDAC1-209ENST00000484305 KLHDC8AQ8IYD2 350 aa12.2□□□□□ -0.46
HDAC1-209ENST00000484305 AFAP1L2Q8N4X5 818 aa12.2□□□□□ -0.46
HDAC1-209ENST00000484305 TBC1D19Q8N5T2 526 aa12.2□□□□□ -0.46
HDAC1-209ENST00000484305 MNS1Q8NEH6 495 aa12.2□□□□□ -0.46
HDAC1-209ENST00000484305 NT5CQ8TCD5 201 aa12.2□□□□□ -0.46
HDAC1-209ENST00000484305 KIAA1191Q96A73 305 aa12.2□□□□□ -0.46
HDAC1-209ENST00000484305 PNPLA2Q96AD5 504 aa12.2□□□□□ -0.46
HDAC1-209ENST00000484305 ESAMQ96AP7 390 aa12.2□□□□□ -0.46
HDAC1-209ENST00000484305 AIF1LQ9BQI0 150 aa12.2□□□□□ -0.46
HDAC1-209ENST00000484305 VN1R1Q9GZP7 353 aa12.2□□□□□ -0.46
HDAC1-209ENST00000484305 LHPPQ9H008 270 aa12.2□□□□□ -0.46
HDAC1-209ENST00000484305 NINJ2Q9NZG7 142 aa12.2□□□□□ -0.46
HDAC1-209ENST00000484305 LOC102723996A0A087X1L8 192 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 IGHV1-45A0A0A0MS14 117 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 NSG1A0A0A6YYJ2 146 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 A0A1W2PQ72 361 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 HMX2A2RU54 273 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 KIF2AO00139 706 aaPredicted RBP12.19□□□□□ -0.46
HDAC1-209ENST00000484305 GALR3O60755 368 aaPredicted RBP12.19□□□□□ -0.46
HDAC1-209ENST00000484305 ZNF888P0CJ79 500 aaPredicted RBP12.19□□□□□ -0.46
HDAC1-209ENST00000484305 C1GALT1C1LP0DN25 315 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 ALOX12P18054 663 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 GNAZP19086 355 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 ECHS1P30084 290 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 GGT5P36269 586 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 HSPA7P48741 367 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 RGS1Q08116 209 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 HYAL2Q12891 473 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 BMPR2Q13873 1038 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 HERC3Q15034 1050 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 PCOLCEQ15113 449 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 DEFB134Q4QY38 66 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 PRR30Q53SZ7 412 aaPredicted RBP12.19□□□□□ -0.46
HDAC1-209ENST00000484305 CDKL4Q5MAI5 379 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 MFSD4BQ5TF39 518 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 MROH9Q5TGP6 573 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 AGAP7PQ5VUJ5 663 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 SULT1C3Q6IMI6 304 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 TMEM205Q6UW68 189 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 ISCA2Q86U28 154 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 RELL1Q8IUW5 271 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 OR5T3Q8NGG3 340 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 CPT1CQ8TCG5 803 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 UTP15Q8TED0 518 aaKnown RBP12.19□□□□□ -0.46
HDAC1-209ENST00000484305 IFT81Q8WYA0 676 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 EXT2Q93063 718 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 AGAP4Q96P64 663 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 KLHL31Q9H511 634 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 ALG9Q9H6U8 611 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 SLAMF7Q9NQ25 335 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 IGSF5Q9NSI5 407 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 WWOXQ9NZC7 414 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 CD274Q9NZQ7 290 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 MTRF1LQ9UGC7 380 aaKnown RBP12.19□□□□□ -0.46
HDAC1-209ENST00000484305 PTBP2Q9UKA9 531 aaKnown RBP12.19□□□□□ -0.46
HDAC1-209ENST00000484305 RNF112Q9ULX5 631 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 RELNP78509 3460 aa12.19□□□□□ -0.46
HDAC1-209ENST00000484305 C4orf51C9J302 202 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 PCDH17O14917 1159 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 PRAMEF4O60810 478 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 STK16O75716 305 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 CELA2AP08217 269 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 LTA4HP09960 611 aaKnown RBP12.18□□□□□ -0.46
HDAC1-209ENST00000484305 PRR35P0CG20 571 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 C8orf89P0DMQ9 161 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 TFEBP19484 476 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 CRABP2P29373 138 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 PHBP35232 272 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 HNF4AP41235 474 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 OLR1P78380 273 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 IRF9Q00978 393 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 CDC16Q13042 620 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 INPP5JQ15735 1006 aaPredicted RBP12.18□□□□□ -0.46
HDAC1-209ENST00000484305 UAP1Q16222 522 aaPredicted RBP12.18□□□□□ -0.46
HDAC1-209ENST00000484305 MINDY4Q4G0A6 757 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 GLE1Q53GS7 698 aaKnown RBP12.18□□□□□ -0.46
HDAC1-209ENST00000484305 IRAK1BP1Q5VVH5 260 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 PRAMEF9Q5VWM5 478 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 IGFL2Q6UWQ7 119 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 LANCL3Q6ZV70 420 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 TBC1D1Q86TI0 1168 aaPredicted RBP12.18□□□□□ -0.46
HDAC1-209ENST00000484305 KBTBD2Q8IY47 623 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 TCAIMQ8N3R3 496 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 ZADH2Q8N4Q0 377 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 PDPRQ8NCN5 879 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 TRPV3Q8NET8 790 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 KIF18AQ8NI77 898 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 STAG3L4Q8TBR4 150 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 CREB3L4Q8TEY5 395 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 PSMF1Q92530 271 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 TM9SF4Q92544 642 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 NXNL1Q96CM4 212 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 PEX11GQ96HA9 241 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 CYTH2Q99418 400 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 SLC6A16Q9GZN6 736 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 AICDAQ9GZX7 198 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 ZNF700Q9H0M5 742 aa12.18□□□□□ -0.46
HDAC1-209ENST00000484305 CDC42EP4Q9H3Q1 356 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms