RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 PRELID2Q8N945 189 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 ACBD4Q8NC06 268 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 OR5T3Q8NGG3 340 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 NRGNQ92686 78 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 RND1Q92730 232 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 SLC30A3Q99726 388 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 RNF6Q9Y252 685 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 ZFHX3Q15911 3703 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 KCNE1BA0A087WTH5 132 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 HS6ST1O60243 411 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 B4GALT2O60909 372 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 ZWINTO95229 277 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 SERPIND1P05546 499 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 SLC35G6P0C7Q6 338 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 IL10P22301 178 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 IMPA1P29218 277 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 CHRNB4P30926 498 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 GRK3P35626 688 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 COILP38432 576 aaPredicted RBP16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 KIF5AQ12840 1032 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 CAPN13Q6MZZ7 669 aaPredicted RBP16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 CASC4Q6P4E1 433 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 UBE2R2Q712K3 238 aaPredicted RBP16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 LGI4Q8N135 537 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 MARVELD2Q8N4S9 558 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 LILRB4Q8NHJ6 448 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 ELP5Q8TE02 316 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 ASB11Q8WXH4 323 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 THAP11Q96EK4 314 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 PTCHD1Q96NR3 888 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 TREX2Q9BQ50 279 aaPredicted RBP16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 KIFC1Q9BW19 673 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 TNFRSF10DQ9UBN6 386 aa16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 KLF13Q9Y2Y9 288 aaPredicted RBP16.9■□□□□ 0.3
CHCHD3-203ENST00000448878 A8MUA0 341 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 FCHO1O14526 889 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 LCMT2O60294 686 aaKnown RBP16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 F7P08709 466 aaPredicted RBP16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 MPC1LP0DKB6 136 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 PAMP19021 973 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 OGNP20774 298 aaKnown RBP16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 DNAJA1P31689 397 aaKnown RBP16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 CLCN7P51798 805 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 ADARP55265 1226 aaKnown RBP16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 TBPL1P62380 186 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 OLR1P78380 273 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 NEPROQ6NW34 567 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 CENPUQ71F23 418 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 PCGF5Q86SE9 256 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 C17orf64Q86WR6 236 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 SLC13A5Q86YT5 568 aaPredicted RBP16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 CCDC71Q8IV32 467 aaPredicted RBP16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 SULF2Q8IWU5 870 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 LRRC56Q8IYG6 542 aaPredicted RBP16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 POGLUT1Q8NBL1 392 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 FBXO15Q8NCQ5 510 aaPredicted RBP16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 HES6Q96HZ4 224 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 OR1F2PQ96R84 312 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 DEFB126Q9BYW3 111 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 TSGA10Q9BZW7 698 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 TP63Q9H3D4 680 aaPredicted RBP16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 NPDC1Q9NQX5 325 aaPredicted RBP16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 EIF2B3Q9NR50 452 aaKnown RBP16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 LANCL2Q9NS86 450 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 VPS9D1Q9Y2B5 631 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 HRH3Q9Y5N1 445 aa16.89■□□□□ 0.29
CHCHD3-203ENST00000448878 ITPR3Q14573 2671 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 PEX1O43933 1283 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 FHP07954 510 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 TFEBP19484 476 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 JAK1P23458 1154 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 HLCSP50747 726 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 IST1P53990 364 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 MLF1P58340 268 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 GPR85P60893 370 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 PPP2R2AP63151 447 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 PMPCAQ10713 525 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 THOC5Q13769 683 aaKnown RBP16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 CILP2Q8IUL8 1156 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 DMRTC2Q8IXT2 367 aaPredicted RBP16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 TMEM156Q8N614 296 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 OR10Q1Q8NGQ4 319 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 TBC1D20Q96BZ9 403 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 TM4SF19Q96DZ7 209 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 ATG10Q9H0Y0 220 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 DEFB127Q9H1M4 99 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 FBXO6Q9NRD1 293 aaPredicted RBP16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 SOX13Q9UN79 622 aa16.88■□□□□ 0.29
CHCHD3-203ENST00000448878 GFYI3L273 518 aa16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 CDK2AP1O14519 115 aa16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 CHST10O43529 356 aa16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 IGFBP2P18065 325 aa16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 PTMSP20962 102 aa16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 MPP1Q00013 466 aa16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 HERC3Q15034 1050 aa16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 DEFB134Q4QY38 66 aa16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 ZNF470Q6ECI4 717 aa16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 ZNF227Q86WZ6 799 aa16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 CPNE9Q8IYJ1 553 aa16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 RPRMLQ8N4K4 120 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms