RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ACVRL1P37023 503 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 GDF5P43026 501 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 CLCN7P51798 805 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 DMC1Q14565 340 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 GLYR1Q49A26 553 aaPredicted RBP17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 MS4A13Q5J8X5 152 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 METTL23Q86XA0 190 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 VANGL1Q8TAA9 524 aaPredicted RBP17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 NECTIN4Q96NY8 510 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 CRISPLD2Q9H0B8 497 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 MAT2BQ9NZL9 334 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 FKBPLQ9UIM3 349 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 VPS4AQ9UN37 437 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 CMAHPQ9Y471 501 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 TTC3P53804 2025 aa17.06■□□□□ 0.32
CDKN1B-201ENST00000228872 LEUTXA8MZ59 168 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 CLIC1O00299 241 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 CSF3P09919 207 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 IFI30P13284 250 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 POLR2CP19387 275 aaPredicted RBP17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 MC4RP32245 332 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 RORCP51449 518 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 SNRPD2P62316 118 aaKnown RBP17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 SERINC3Q13530 473 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 TAF1AQ15573 450 aaPredicted RBP17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 PTCHD3Q3KNS1 767 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 FAAH2Q6GMR7 532 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 OVOS1Q6IE37 1185 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 ERICH5Q6P6B1 374 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 CD300LGQ6UXG3 332 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 CCDC149Q6ZUS6 474 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 SLC51BQ86UW2 128 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 SLC5A8Q8N695 610 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 UTP15Q8TED0 518 aaKnown RBP17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 IGSF8Q969P0 613 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 MTFMTQ96DP5 389 aaKnown RBP17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 OPALINQ96PE5 141 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 TSSK3Q96PN8 268 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 DPH2Q9BQC3 489 aaPredicted RBP17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 ACBD6Q9BR61 282 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 ELAC1Q9H777 363 aaKnown RBP17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 C12orf10Q9HB07 376 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 TMEM39AQ9NV64 488 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 TEKT2Q9UIF3 430 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 DUSP12Q9UNI6 340 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 ARIH1Q9Y4X5 557 aaPredicted RBP17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 A0A1W2PQH9 124 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 F8W810 466 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 RAMP2O60895 175 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 ENGP17813 658 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 KIR2DL3P43628 341 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 CLCN4P51793 760 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 SMARCB1Q12824 385 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 QPRTQ15274 297 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 ZRANB3Q5FWF4 1079 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 GLB1LQ6UWU2 654 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 FAM131AQ6UXB0 335 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 ANKRD33Q7Z3H0 272 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 CIR1Q86X95 450 aaPredicted RBP17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 SNTG1Q9NSN8 517 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 TRPS1Q9UHF7 1281 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 FNDC3AQ9Y2H6 1198 aaKnown RBP17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 SCN5AQ14524 2016 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 MICAL3Q7RTP6 2002 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 MYO16Q9Y6X6 1858 aa17.05■□□□□ 0.32
CDKN1B-201ENST00000228872 GLUD1P00367 558 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 C1QBP02746 253 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 TACR1P25103 407 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 TGM4P49221 684 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 KCNJ10P78508 379 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 CLLU1OSQ5K130 101 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 ZNF648Q5T619 568 aaPredicted RBP17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 LRRC66Q68CR7 880 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 CREB3L2Q70SY1 520 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 OR10G2Q8NGC3 310 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 WDR36Q8NI36 951 aaKnown RBP17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 USP7Q93009 1102 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 SLC39A13Q96H72 371 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 ACPTQ9BZG2 426 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 HHATLQ9HCP6 504 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 RLIMQ9NVW2 624 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 SLC6A14Q9UN76 642 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 FADS2P1A8MWK0 482 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 LOC730098B7Z3J9 87 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 M0QZQ0 153 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 AGRPO00253 132 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 OR2B3O76000 313 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 FHP07954 510 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 MNX1P50219 401 aaPredicted RBP17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 NELL1Q92832 810 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 TMEM161AQ9NX61 479 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 IMPAD1Q9NX62 359 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 DHRS7Q9Y394 339 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 C2orf81A6NN90 581 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 TNFRSF11BO00300 401 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 SEC14L5O43304 696 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 PRAMEF11O60813 436 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 LRATO95237 230 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 PSMA3P25788 255 aa17.04■□□□□ 0.32
CDKN1B-201ENST00000228872 PPIGQ13427 754 aaKnown RBP eCLIP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms