RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 TRIM8Q9BZR9 551 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 REXO4Q9GZR2 422 aaKnown RBP17.37■□□□□ 0.37
VIM-201ENST00000224237 MUC13Q9H3R2 512 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 TM9SF3Q9HD45 589 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 SERHLQ9NQF3 203 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 FAM120CQ9NX05 1096 aaKnown RBP17.37■□□□□ 0.37
VIM-201ENST00000224237 C15orf41Q9Y2V0 281 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 NEUROG3Q9Y4Z2 214 aa17.37■□□□□ 0.37
VIM-201ENST00000224237 A0A096LPI6 279 aa17.36■□□□□ 0.37
VIM-201ENST00000224237 PLPP1O14494 284 aa17.36■□□□□ 0.37
VIM-201ENST00000224237 LCMT2O60294 686 aaKnown RBP17.36■□□□□ 0.37
VIM-201ENST00000224237 KLK1P06870 262 aa17.36■□□□□ 0.37
VIM-201ENST00000224237 ANPEPP15144 967 aa17.36■□□□□ 0.37
VIM-201ENST00000224237 RPL3P39023 403 aaKnown RBP17.36■□□□□ 0.37
VIM-201ENST00000224237 HNRNPFP52597 415 aaKnown RBP17.36■□□□□ 0.37
VIM-201ENST00000224237 ATXN3P54252 364 aaPredicted RBP17.36■□□□□ 0.37
VIM-201ENST00000224237 LIPEQ05469 1076 aa17.36■□□□□ 0.37
VIM-201ENST00000224237 C1orf61Q13536 156 aa17.36■□□□□ 0.37
VIM-201ENST00000224237 OR4F3Q6IEY1 312 aa17.36■□□□□ 0.37
VIM-201ENST00000224237 PAGE2Q7Z2X7 111 aa17.36■□□□□ 0.37
VIM-201ENST00000224237 TMEM132CQ8N3T6 1108 aa17.36■□□□□ 0.37
VIM-201ENST00000224237 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.36■□□□□ 0.37
VIM-201ENST00000224237 NELL1Q92832 810 aa17.36■□□□□ 0.37
VIM-201ENST00000224237 SH3GL1Q99961 368 aa17.36■□□□□ 0.37
VIM-201ENST00000224237 MYNNQ9NPC7 610 aa17.36■□□□□ 0.37
VIM-201ENST00000224237 SNX7Q9UNH6 387 aa17.36■□□□□ 0.37
VIM-201ENST00000224237 PCDHGA2Q9Y5H1 932 aa17.36■□□□□ 0.37
VIM-201ENST00000224237 DFNA5O60443 496 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 GCKP35557 465 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 AHRP35869 848 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 GSK3BP49841 420 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 SESN3P58005 492 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 ELOCQ15369 112 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 ZNF425Q6IV72 752 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 R3HCC1LQ7Z5L2 792 aaKnown RBP17.35■□□□□ 0.37
VIM-201ENST00000224237 SPATA24Q86W54 205 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 DHFR2Q86XF0 187 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 PLD3Q8IV08 490 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 RBM12BQ8IXT5 1001 aaKnown RBP17.35■□□□□ 0.37
VIM-201ENST00000224237 ZDHHC1Q8WTX9 485 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 KCTD14Q9BQ13 255 aaPredicted RBP17.35■□□□□ 0.37
VIM-201ENST00000224237 DUSP26Q9BV47 211 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 PAIP1Q9H074 479 aaKnown RBP17.35■□□□□ 0.37
VIM-201ENST00000224237 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.35■□□□□ 0.37
VIM-201ENST00000224237 CEP192Q8TEP8 1941 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 RFXANKO14593 260 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 HAT1O14929 419 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 NDUFS4O43181 175 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 GBAP04062 536 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 BCL6P41182 706 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 PTDSS1P48651 473 aaKnown RBP17.35■□□□□ 0.37
VIM-201ENST00000224237 MTPNP58546 118 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 MRPS22P82650 360 aaKnown RBP17.35■□□□□ 0.37
VIM-201ENST00000224237 CPTPQ5TA50 214 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 DNAJC14Q6Y2X3 702 aaPredicted RBP17.35■□□□□ 0.37
VIM-201ENST00000224237 IKBIPQ70UQ0 350 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 ANKRD46Q86W74 232 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 FAM46DQ8NEK8 389 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 CREB3L4Q8TEY5 395 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 C16orf78Q8WTQ4 265 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 LRGUKQ96M69 825 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 QRFPRQ96P65 431 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 GBP5Q96PP8 586 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 F2RL3Q96RI0 385 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 TRIM15Q9C019 465 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 REEP4Q9H6H4 257 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 GMPR2Q9P2T1 348 aaKnown RBP17.35■□□□□ 0.37
VIM-201ENST00000224237 AP3M1Q9Y2T2 418 aa17.35■□□□□ 0.37
VIM-201ENST00000224237 CROCCQ5TZA2 2017 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 TECTAO75443 2155 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 TRBV5-3A0A0A0MS03 114 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 GABRR3A8MPY1 467 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 C8BP07358 591 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 PIM1P11309 404 aaPredicted RBP17.34■□□□□ 0.37
VIM-201ENST00000224237 TPP2P29144 1249 aaPredicted RBP17.34■□□□□ 0.37
VIM-201ENST00000224237 WNT3P56703 355 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 RUNDC3AQ59EK9 446 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 SPAG17Q6Q759 2223 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 IFNEQ86WN2 208 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 NUDT13Q86X67 352 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 PTRH1Q86Y79 214 aaKnown RBP17.34■□□□□ 0.37
VIM-201ENST00000224237 MSRB3Q8IXL7 192 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 TRPV3Q8NET8 790 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 VPS37AQ8NEZ2 397 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 C1orf216Q8TAB5 229 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 FLVCR1-AS1Q8TAF5 88 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 DNASE2BQ8WZ79 361 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 ZUFSPQ96AP4 578 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 RGMAQ96B86 450 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 COQ8BQ96D53 544 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 RSRC1Q96IZ7 334 aaKnown RBP17.34■□□□□ 0.37
VIM-201ENST00000224237 ZNF717Q9BY31 904 aaPredicted RBP17.34■□□□□ 0.37
VIM-201ENST00000224237 DUSP15Q9H1R2 295 aaPredicted RBP17.34■□□□□ 0.37
VIM-201ENST00000224237 ATAD3AQ9NVI7 634 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 SLC25A37Q9NYZ2 338 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 ACTR3BQ9P1U1 418 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 ATP6V1HQ9UI12 483 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 WBP11Q9Y2W2 641 aaKnown RBP17.34■□□□□ 0.37
VIM-201ENST00000224237 PCDHB14Q9Y5E9 798 aa17.34■□□□□ 0.37
VIM-201ENST00000224237 ENTPD2Q9Y5L3 495 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms