RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 CAPN13Q6MZZ7 669 aaPredicted RBP15.48■□□□□ 0.07
COLCA2-207ENST00000639470 TMEM205Q6UW68 189 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 ISLR2Q6UXK2 745 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 NDUFAF7Q7L592 441 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 GALNT7Q86SF2 657 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 KBTBD2Q8IY47 623 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 ZBED8Q8IZ13 594 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 MFSD9Q8NBP5 474 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 OR51Q1Q8NH59 317 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 GRHL3Q8TE85 626 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 SLC13A3Q8WWT9 602 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 TSLPQ969D9 159 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 FBXL8Q96CD0 374 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 TGIF2Q9GZN2 237 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 AICDAQ9GZX7 198 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 MOCS1Q9NZB8 636 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 GRHL1Q9NZI5 618 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 ZFATQ9P243 1243 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 ERRFI1Q9UJM3 462 aaPredicted RBP15.48■□□□□ 0.07
COLCA2-207ENST00000639470 MTO1Q9Y2Z2 717 aaKnown RBP15.48■□□□□ 0.07
COLCA2-207ENST00000639470 NAALAD2Q9Y3Q0 740 aa15.48■□□□□ 0.07
COLCA2-207ENST00000639470 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.48■□□□□ 0.07
COLCA2-207ENST00000639470 KCNE1BA0A087WTH5 132 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 LOC102723996A0A087X1L8 192 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 MAN1A2O60476 641 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 NSA2O95478 260 aaKnown RBP15.47■□□□□ 0.07
COLCA2-207ENST00000639470 COL8A1P27658 744 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 HNF4AP41235 474 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 GDF5P43026 501 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 PAFAH1B1P43034 410 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 AVPR1BP47901 424 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 CDC16Q13042 620 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 ZNF169Q14929 603 aaPredicted RBP15.47■□□□□ 0.07
COLCA2-207ENST00000639470 TSNQ15631 228 aaKnown RBP15.47■□□□□ 0.07
COLCA2-207ENST00000639470 NDUFA9Q16795 377 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 IRAK1BP1Q5VVH5 260 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 DUPD1Q68J44 220 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 LRRC8EQ6NSJ5 796 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 ANKRD53Q8N9V6 530 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 TM9SF4Q92544 642 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 PEX11GQ96HA9 241 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 MAGEB10Q96LZ2 347 aaPredicted RBP15.47■□□□□ 0.07
COLCA2-207ENST00000639470 BARD1Q99728 777 aaKnown RBP15.47■□□□□ 0.07
COLCA2-207ENST00000639470 MCMBPQ9BTE3 642 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 ZNF700Q9H0M5 742 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 LRRC4CQ9HCJ2 640 aa15.47■□□□□ 0.07
COLCA2-207ENST00000639470 USP9YO00507 2555 aaPredicted RBP15.47■□□□□ 0.07
COLCA2-207ENST00000639470 A0A1W2PQ72 361 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 ANKUB1A6NFN9 424 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 CCDC188H7C350 402 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 PRPF4O43172 522 aaKnown RBP eCLIP15.46■□□□□ 0.076e-11■■■■□ 19.5
COLCA2-207ENST00000639470 PHGDHO43175 533 aaKnown RBP15.46■□□□□ 0.07
COLCA2-207ENST00000639470 NDUFS4O43181 175 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 SERPINA7P05543 415 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 HIST1H2AGP0C0S8 130 aaPredicted RBP15.46■□□□□ 0.07
COLCA2-207ENST00000639470 ZNF888P0CJ79 500 aaPredicted RBP15.46■□□□□ 0.07
COLCA2-207ENST00000639470 C8orf89P0DMQ9 161 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 GP1BBP13224 206 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 HIST1H2ADP20671 130 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 CXCR2P25025 360 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 VARSP26640 1264 aaKnown RBP15.46■□□□□ 0.07
COLCA2-207ENST00000639470 DEFB134Q4QY38 66 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 ANKRD37Q7Z713 158 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 TMPRSS11BQ86T26 416 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 THOC6Q86W42 341 aaKnown RBP15.46■□□□□ 0.07
COLCA2-207ENST00000639470 ABHD11Q8NFV4 315 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 OR4K1Q8NGD4 311 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 OR1N1Q8NGS0 311 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 SSC4DQ8WTU2 575 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 LRRC39Q96DD0 335 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 VPS39Q96JC1 886 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 HIST1H2AHQ96KK5 128 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 IMMP1LQ96LU5 166 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 CYTH2Q99418 400 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 HIST1H2AJQ99878 128 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 H2AFJQ9BTM1 129 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 PCBD2Q9H0N5 130 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 KLHL31Q9H511 634 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 EPS8L2Q9H6S3 715 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 SAYSD1Q9NPB0 183 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 LANCL2Q9NS86 450 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 SLC22A14Q9Y267 594 aa15.46■□□□□ 0.07
COLCA2-207ENST00000639470 UTP20O75691 2785 aaKnown RBP15.46■□□□□ 0.06
COLCA2-207ENST00000639470 NCF1BA6NI72 391 aaPredicted RBP15.45■□□□□ 0.06
COLCA2-207ENST00000639470 NCF1CA8MVU1 366 aaPredicted RBP15.45■□□□□ 0.06
COLCA2-207ENST00000639470 H0YIG0 161 aa15.45■□□□□ 0.06
COLCA2-207ENST00000639470 TXNDC9O14530 226 aa15.45■□□□□ 0.06
COLCA2-207ENST00000639470 FAM155BO75949 473 aa15.45■□□□□ 0.06
COLCA2-207ENST00000639470 WDPCPO95876 746 aa15.45■□□□□ 0.06
COLCA2-207ENST00000639470 C1QAP02745 245 aa15.45■□□□□ 0.06
COLCA2-207ENST00000639470 NCF1P14598 390 aaPredicted RBP15.45■□□□□ 0.06
COLCA2-207ENST00000639470 CCR8P51685 355 aa15.45■□□□□ 0.06
COLCA2-207ENST00000639470 GPX6P59796 221 aa15.45■□□□□ 0.06
COLCA2-207ENST00000639470 RAB8AP61006 207 aa15.45■□□□□ 0.06
COLCA2-207ENST00000639470 FRG1Q14331 258 aaKnown RBP15.45■□□□□ 0.06
COLCA2-207ENST00000639470 UBAP2Q5T6F2 1119 aaKnown RBP15.45■□□□□ 0.06
COLCA2-207ENST00000639470 ADNP2Q6IQ32 1131 aa15.45■□□□□ 0.06
COLCA2-207ENST00000639470 CAMKVQ8NCB2 501 aa15.45■□□□□ 0.06
COLCA2-207ENST00000639470 SPATA4Q8NEY3 305 aa15.45■□□□□ 0.06
COLCA2-207ENST00000639470 SLC5A11Q8WWX8 675 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms