RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 KCNN4O15554 427 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 ITM2AO43736 263 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 FZD7O75084 574 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 CD99P14209 185 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 PDGFRAP16234 1089 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 RBMS1P29558 406 aaKnown RBP4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 HNRNPH1P31943 449 aaKnown RBP4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 ASCL1P50553 236 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 ERVPABLB-1P60509 514 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 STX1BP61266 288 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 TUBB4BP68371 445 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 ARF5P84085 180 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZNF91Q05481 1191 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 FCHO2Q0JRZ9 810 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 DNAJC3Q13217 504 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 PPP2R5CQ13362 524 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 PSMD5Q16401 504 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 DECR1Q16698 335 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 ANKRD20A4Q4UJ75 823 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 ANKRD20A8PQ5CZ79 823 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 ANKRD20A2Q5SQ80 823 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 ANKRD20A1Q5TYW2 823 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 ANKRD20A3Q5VUR7 823 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 SHEQ5VZ18 495 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 PLBD1Q6P4A8 553 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 FUT10Q6P4F1 479 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 PPP1R21Q6ZMI0 780 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 SLC16A12Q6ZSM3 486 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 TIPARPQ7Z3E1 657 aaKnown RBP4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 TUSC5Q8IXB3 177 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 KLHL7Q8IXQ5 586 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 GCSAMQ8N6F7 178 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 OR8H1Q8NGG4 311 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 CCDC26Q8TAB7 109 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 OLIG1Q8TAK6 271 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 FIBINQ8TAL6 211 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 THAP6Q8TBB0 222 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 MGARPQ8TDB4 240 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 EXT2Q93063 718 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 PTP4A1Q93096 173 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 LURAP1Q96LR2 239 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 INPP5KQ9BT40 448 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 MMADHCQ9H3L0 296 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 GOLPH3LQ9H4A5 285 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 MAP6D1Q9H9H5 199 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 C17orf75Q9HAS0 396 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 MARCH5Q9NX47 278 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 DNAJB9Q9UBS3 223 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 ARMCX3Q9UH62 379 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 MYRFQ9Y2G1 1151 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 PCDHGA1Q9Y5H4 931 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 TDRD15B5MCY1 1934 aaKnown RBP4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 TGP01266 2768 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 PKDREJQ9NTG1 2253 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 SLC33A1O00400 549 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 CLDN4O14493 209 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 ASAP2O43150 1006 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 SSX4O60224 188 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 BCAR3O75815 825 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 LDOC1O95751 146 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 IGLV2-14P01704 120 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 SLC9A3P48764 834 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 CTSCP53634 463 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 MLLT10P55197 1068 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 CDH13P55290 713 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 SNU13P55769 128 aaKnown RBP4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 IL9RQ01113 521 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 SPOCK1Q08629 439 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 TEAD2Q15562 447 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 UGCGQ16739 394 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 SYT16Q17RD7 645 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 OTUD1Q5VV17 481 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 CAPRIN2Q6IMN6 1127 aaKnown RBP4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZNF449Q6P9G9 518 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZNF627Q7L945 461 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 OTOAQ7RTW8 1153 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 ABI3BPQ7Z7G0 1075 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 HOOK3Q86VS8 718 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 SLC38A9Q8NBW4 561 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 PPFIBP2Q8ND30 876 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 SEPT1Q8WYJ6 367 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 CORO2AQ92828 525 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 NXNL1Q96CM4 212 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 CHFRQ96EP1 664 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 LINC00615Q96LM1 132 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 ABHD6Q9BV23 337 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 WDR26Q9H7D7 661 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 MMP25Q9NPA2 562 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 KRCC1Q9NPI7 259 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 CNGB3Q9NQW8 809 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZNF71Q9NQZ8 489 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 ECHDC1Q9NTX5 307 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 MSRB1Q9NZV6 116 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 CDC14AQ9UNH5 594 aa4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 MRPL11Q9Y3B7 192 aaKnown RBP4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZNF638Q14966 1978 aaKnown RBP4.51□□□□□ -1.69
HMGB1P23-201ENST00000518743 C15orf62A8K5M9 175 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZBTB43O43298 467 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 BUD23O43709 281 aaKnown RBP4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 MED24O75448 989 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms