RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 VARSP26640 1264 aaKnown RBP14.28□□□□□ -0.12
RNF4-210ENST00000508235 AVPR1BP47901 424 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 NFKB2Q00653 900 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 CHIT1Q13231 466 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 SLBPQ14493 270 aaKnown RBP eCLIP14.28□□□□□ -0.12
RNF4-210ENST00000508235 CCDC153Q494R4 210 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 MLIPQ5VWP3 458 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 LCN10Q6JVE6 187 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 TMEM214Q6NUQ4 689 aaKnown RBP14.28□□□□□ -0.12
RNF4-210ENST00000508235 SLC22A9Q8IVM8 553 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 CYP4X1Q8N118 509 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 ENDOVQ8N8Q3 282 aaKnown RBP14.28□□□□□ -0.12
RNF4-210ENST00000508235 ZNF740Q8NDX6 193 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 NT5CQ8TCD5 201 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 COL26A1Q96A83 441 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 CCDC126Q96EE4 140 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 C10orf90Q96M02 699 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 CATSPER2Q96P56 530 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 WDR54Q9H977 334 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 SYNPO2LQ9H987 977 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 NXT1Q9UKK6 140 aaKnown RBP14.28□□□□□ -0.12
RNF4-210ENST00000508235 ASB1Q9Y576 335 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 SLC22A7Q9Y694 548 aa14.28□□□□□ -0.12
RNF4-210ENST00000508235 FREM2Q5SZK8 3169 aa14.27□□□□□ -0.12
RNF4-210ENST00000508235 ANKDD1BA6NHY2 528 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 H0YIG0 161 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 E2F3O00716 465 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 COPEO14579 308 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 SERPIND1P05546 499 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 EPORP19235 508 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 WT1P19544 449 aaPredicted RBP14.27□□□□□ -0.13
RNF4-210ENST00000508235 F8A1P23610 371 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 ATP5F1P24539 256 aaPredicted RBP14.27□□□□□ -0.13
RNF4-210ENST00000508235 EEF1DP29692 281 aaKnown RBP14.27□□□□□ -0.13
RNF4-210ENST00000508235 SERPINB1P30740 379 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 CRHR1P34998 444 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 HNF4AP41235 474 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 STXBP1P61764 594 aaKnown RBP14.27□□□□□ -0.13
RNF4-210ENST00000508235 CDC20Q12834 499 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 GTF2H2Q13888 395 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 DOC2AQ14183 400 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 E2F2Q14209 437 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 HERC3Q15034 1050 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 LIPJQ5W064 366 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 GTF2H2CQ6P1K8 395 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 SH2D5Q6ZV89 423 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 ABHD13Q7L211 337 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 OVCH1Q7RTY7 1134 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 GOLGA7Q7Z5G4 137 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 TMEM151AQ8N4L1 468 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 ARHGEF39Q8N4T4 335 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 MMABQ96EY8 250 aaPredicted RBP14.27□□□□□ -0.13
RNF4-210ENST00000508235 MAGEB10Q96LZ2 347 aaPredicted RBP14.27□□□□□ -0.13
RNF4-210ENST00000508235 IQCGQ9H095 443 aaKnown RBP14.27□□□□□ -0.13
RNF4-210ENST00000508235 SLC26A1Q9H2B4 701 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 SPNS1Q9H2V7 528 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 ANKHQ9HCJ1 492 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 ZNF282Q9UDV7 671 aaPredicted RBP14.27□□□□□ -0.13
RNF4-210ENST00000508235 TCFL5Q9UL49 500 aa14.27□□□□□ -0.13
RNF4-210ENST00000508235 A8MT66 165 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 CLEC3AO75596 197 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 WFS1O76024 890 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 SIX3O95343 332 aaPredicted RBP14.26□□□□□ -0.13
RNF4-210ENST00000508235 NSA2O95478 260 aaKnown RBP14.26□□□□□ -0.13
RNF4-210ENST00000508235 CAPN1P07384 714 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 SERPINA6P08185 405 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 FBLP22087 321 aaKnown RBP14.26□□□□□ -0.13
RNF4-210ENST00000508235 FOLR3P41439 243 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 OR1D4P47884 311 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 RHDQ02161 417 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 OCA2Q04671 838 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 SLC18A2Q05940 514 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 DSG2Q14126 1118 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 KRT71Q3SY84 523 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 GRHL2Q6ISB3 625 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 MRPL14Q6P1L8 145 aaKnown RBP14.26□□□□□ -0.13
RNF4-210ENST00000508235 MED27Q6P2C8 311 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 C16orf46Q6P387 395 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 TRABD2AQ86V40 505 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.26□□□□□ -0.13
RNF4-210ENST00000508235 ANKRD53Q8N9V6 530 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 KCT2Q8NC54 265 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 RDH11Q8TC12 318 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 ATP6V1E2Q96A05 226 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 REPS1Q96D71 796 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 IPPKQ9H8X2 491 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 ACTR8Q9H981 624 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 MKS1Q9NXB0 559 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 SENP1Q9P0U3 644 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 ADGRE2Q9UHX3 823 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 MID2Q9UJV3 735 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 MRPS18BQ9Y676 258 aaKnown RBP14.26□□□□□ -0.13
RNF4-210ENST00000508235 MAU2Q9Y6X3 613 aa14.26□□□□□ -0.13
RNF4-210ENST00000508235 A0A0A6YYC8 382 aaPredicted RBP14.25□□□□□ -0.13
RNF4-210ENST00000508235 I3L1I5 382 aaPredicted RBP14.25□□□□□ -0.13
RNF4-210ENST00000508235 NKX2-8O15522 239 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 FOXS1O43638 330 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 MED26O95402 600 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 STATHP02808 62 aa14.25□□□□□ -0.13
RNF4-210ENST00000508235 ITGB2P05107 769 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms