RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 RHEBL1Q8TAI7 183 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 UBTD2Q8WUN7 234 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 ESAMQ96AP7 390 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 TM4SF19Q96DZ7 209 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 MMABQ96EY8 250 aaPredicted RBP12.26□□□□□ -0.45
COL5A1-206ENST00000465877 MACROD1Q9BQ69 325 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 AIF1LQ9BQI0 150 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 VPS11Q9H270 941 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 EPB41L4BQ9H329 900 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 DNAJC11Q9NVH1 559 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 GPRC5BQ9NZH0 403 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 ZNF282Q9UDV7 671 aaPredicted RBP12.26□□□□□ -0.45
COL5A1-206ENST00000465877 ASB1Q9Y576 335 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 DOCK10Q96BY6 2186 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 GCN1Q92616 2671 aaKnown RBP12.25□□□□□ -0.45
COL5A1-206ENST00000465877 IGLV3-12A0A075B6K2 115 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 VSTM2BA6NLU5 285 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 SYCE1LA8MT33 242 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 TRIM49D1C9J1S8 452 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 FFAR3O14843 346 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 GPR42O15529 346 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 FOXS1O43638 330 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 STK16O75716 305 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 NSA2O95478 260 aaKnown RBP12.25□□□□□ -0.45
COL5A1-206ENST00000465877 SFTPCP11686 197 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 IL1RNP18510 177 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 VARSP26640 1264 aaKnown RBP12.25□□□□□ -0.45
COL5A1-206ENST00000465877 GCAP28676 217 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 AHRP35869 848 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 SCTRP47872 440 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 AVPR1BP47901 424 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 OCA2Q04671 838 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 RGS1Q08116 209 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 SLBPQ14493 270 aaKnown RBP eCLIP12.25□□□□□ -0.45
COL5A1-206ENST00000465877 SSPNQ14714 243 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 PDK4Q16654 411 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 TECRLQ5HYJ1 363 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 ATG9BQ674R7 924 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 KLC3Q6P597 504 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 SHISA6Q6ZSJ9 500 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.25□□□□□ -0.45
COL5A1-206ENST00000465877 SNX31Q8N9S9 440 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 ANKRD53Q8N9V6 530 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 KCT2Q8NC54 265 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 OR9A4Q8NGU2 314 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 C9orf43Q8TAL5 461 aaPredicted RBP12.25□□□□□ -0.45
COL5A1-206ENST00000465877 STT3BQ8TCJ2 826 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 SLC13A3Q8WWT9 602 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 MIEF2Q96C03 454 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 MOCOSQ96EN8 888 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 IP6K3Q96PC2 410 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 CRB3Q9BUF7 120 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 ANKZF1Q9H8Y5 726 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 ACSS2Q9NR19 701 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 C14orf105Q9NVL8 296 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 TRPC4Q9UBN4 977 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 ZFP69BQ9UJL9 534 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 PTBP2Q9UKA9 531 aaKnown RBP12.25□□□□□ -0.45
COL5A1-206ENST00000465877 MAP4K5Q9Y4K4 846 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 SCN2AQ99250 2005 aa12.25□□□□□ -0.45
COL5A1-206ENST00000465877 CCDC189A1A4V9 331 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 H0YIG0 161 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 MKRN2OSH3BPM6 223 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 CCNT2O60583 730 aaKnown RBP12.24□□□□□ -0.45
COL5A1-206ENST00000465877 SERPIND1P05546 499 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 ZGLP1P0C6A0 271 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 MTHFD2P13995 350 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 KCNC1P48547 511 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 AGTR2P50052 363 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 MAT1AQ00266 395 aaKnown RBP12.24□□□□□ -0.45
COL5A1-206ENST00000465877 KLC1Q07866 573 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 NFATC3Q12968 1075 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 PWP1Q13610 501 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 ACAP2Q15057 778 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 SYT16Q17RD7 645 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 TSNAXIP1Q2TAA8 658 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 VWA2Q5GFL6 755 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 SLCO4C1Q6ZQN7 724 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 PRSS58Q8IYP2 241 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 PLD6Q8N2A8 252 aaKnown RBP12.24□□□□□ -0.45
COL5A1-206ENST00000465877 ABHD17AQ96GS6 310 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 GPR78Q96P69 363 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 CD244Q9BZW8 370 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 ING2Q9H160 280 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 SLC25A18Q9H1K4 315 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 EHD1Q9H4M9 534 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 ANKHQ9HCJ1 492 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 MKKSQ9NPJ1 570 aaPredicted RBP12.24□□□□□ -0.45
COL5A1-206ENST00000465877 HCN3Q9P1Z3 774 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 PSMC3IPQ9P2W1 217 aaPredicted RBP12.24□□□□□ -0.45
COL5A1-206ENST00000465877 COPG2Q9UBF2 871 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 XPR1Q9UBH6 696 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 FETUBQ9UGM5 382 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 TP53TG5Q9Y2B4 290 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 HS3ST3B1Q9Y662 390 aa12.24□□□□□ -0.45
COL5A1-206ENST00000465877 ZNF860A6NHJ4 632 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 ESPNB1AK53 854 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 K7EPI3 171 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 PEX12O00623 359 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 CLGNO14967 610 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms