RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 ZNF397Q8NF99 534 aaPredicted RBP4.71□□□□□ -1.66
GABPB1-204ENST00000396464 VANGL1Q8TAA9 524 aaPredicted RBP4.71□□□□□ -1.66
GABPB1-204ENST00000396464 DDI1Q8WTU0 396 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 HDAC7Q8WUI4 952 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 TSEN15Q8WW01 171 aaKnown RBP4.71□□□□□ -1.66
GABPB1-204ENST00000396464 ADAMTS14Q8WXS8 1223 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 SNAPC3Q92966 411 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 MCHR2Q969V1 340 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 KAZALD1Q96I82 304 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 PRMT6Q96LA8 375 aaPredicted RBP4.71□□□□□ -1.66
GABPB1-204ENST00000396464 OR1F2PQ96R84 312 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 OR6C1Q96RD1 312 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 BPIFA3Q9BQP9 254 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 C16orf70Q9BSU1 422 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 ALKBH7Q9BT30 221 aaPredicted RBP4.71□□□□□ -1.66
GABPB1-204ENST00000396464 TMEM43Q9BTV4 400 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 IDI2Q9BXS1 227 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 TDRD1Q9BXT4 1180 aaKnown RBP4.71□□□□□ -1.66
GABPB1-204ENST00000396464 ADGRE3Q9BY15 652 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 WWTR1Q9GZV5 400 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 DPAGT1Q9H3H5 408 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 DPEP3Q9H4B8 488 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 RAD21L1Q9H4I0 556 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 MAGIXQ9H6Y5 334 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 ZFP14Q9HCL3 533 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 ANKRD10Q9NXR5 420 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 KLHL28Q9NXS3 571 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 RNF181Q9P0P0 153 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 DBF4Q9UBU7 674 aaPredicted RBP4.71□□□□□ -1.66
GABPB1-204ENST00000396464 WNT16Q9UBV4 365 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 FOXJ3Q9UPW0 622 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 MST1RQ04912 1400 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 HEATR9A2RTY3 570 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 TMEM202A6NGA9 273 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 LEFTY2O00292 366 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 GMNNO75496 209 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 UFL1O94874 794 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 STBD1O95210 358 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 CHRNGP07510 517 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 ELANEP08246 267 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 OR2T7P0C7T2 308 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 PNMTP11086 282 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 HSD17B3P37058 310 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 NUDT6P53370 316 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 TPTEP56180 551 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 TPM4P67936 248 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 NUCB2P80303 420 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 BNC1Q01954 994 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 NHLH2Q02577 135 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 ITIH3Q06033 890 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 DRP2Q13474 957 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 SELPLGQ14242 412 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 MVPQ14764 893 aaKnown RBP4.7□□□□□ -1.66
GABPB1-204ENST00000396464 AANATQ16613 207 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 MTHFSDQ2M296 383 aaKnown RBP4.7□□□□□ -1.66
GABPB1-204ENST00000396464 SYTL3Q4VX76 610 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 PRAMEF19Q5SWL8 479 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 AGAP6Q5VW22 663 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 C1QL3Q5VWW1 255 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 LYSMD4Q5XG99 296 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 ASPHD2Q6ICH7 369 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 MFSD12Q6NUT3 480 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 KIRREL2Q6UWL6 708 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 YRDCQ86U90 279 aaKnown RBP4.7□□□□□ -1.66
GABPB1-204ENST00000396464 CCDC60Q8IWA6 550 aaPredicted RBP4.7□□□□□ -1.66
GABPB1-204ENST00000396464 LCORLQ8N3X6 602 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 PARP16Q8N5Y8 322 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 CLHC1Q8NHS4 586 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 CHPT1Q8WUD6 406 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 OR1E3Q8WZA6 343 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 MCUR1Q96AQ8 359 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 ART5Q96L15 291 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 CHP1Q99653 195 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 SH3GL1Q99961 368 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 TRIM62Q9BVG3 475 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 FNDC11Q9BVV2 318 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 SNX25Q9H3E2 840 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 AUNIPQ9H7T9 357 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 COG4Q9H9E3 785 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 CDH20Q9HBT6 801 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 TREM1Q9NP99 234 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 GPR173Q9NS66 373 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 IL20Q9NYY1 176 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 TRPM5Q9NZQ8 1165 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 PDP1Q9P0J1 537 aaPredicted RBP4.7□□□□□ -1.66
GABPB1-204ENST00000396464 SEMA5BQ9P283 1151 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 RHCGQ9UBD6 479 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 RNF14Q9UBS8 474 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 PEF1Q9UBV8 284 aaKnown RBP4.7□□□□□ -1.66
GABPB1-204ENST00000396464 KCNE5Q9UJ90 142 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 NOCTQ9UK39 431 aaKnown RBP4.7□□□□□ -1.66
GABPB1-204ENST00000396464 AMFRQ9UKV5 643 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 TNNQ9UQP3 1299 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 ATG4BQ9Y4P1 393 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 DISP3Q9P2K9 1392 aa4.7□□□□□ -1.66
GABPB1-204ENST00000396464 BICRAQ9NZM4 1560 aa4.69□□□□□ -1.66
GABPB1-204ENST00000396464 A0A1W2PPK0 400 aa4.69□□□□□ -1.66
GABPB1-204ENST00000396464 DDTLA6NHG4 134 aaPredicted RBP4.69□□□□□ -1.66
GABPB1-204ENST00000396464 GABRR3A8MPY1 467 aa4.69□□□□□ -1.66
GABPB1-204ENST00000396464 TMCO5BA8MYB1 307 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms