RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 LDB2O43679 373 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 GABRB3P28472 473 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 ZNF763Q0D2J5 394 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 PCBP2Q15366 365 aaKnown RBP eCLIP16.86■□□□□ 0.298e-10■■■■□ 24.4
PTPRU-202ENST00000373779 RAB41Q5JT25 222 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 MARCH8Q5T0T0 291 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 OR10H4Q8NGA5 316 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 OR4K1Q8NGD4 311 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 OR13J1Q8NGT2 312 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 FAM129BQ96TA1 746 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 BCL7BQ9BQE9 202 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 DNAJC27Q9NZQ0 273 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 MITFO75030 526 aaPredicted RBP16.85■□□□□ 0.29
PTPRU-202ENST00000373779 C8AP07357 584 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 ARCN1P48444 511 aaKnown RBP16.85■□□□□ 0.29
PTPRU-202ENST00000373779 SMSP52788 366 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 ABATP80404 500 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 CSTF1Q05048 431 aaKnown RBP16.85■□□□□ 0.29
PTPRU-202ENST00000373779 GALNT7Q86SF2 657 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 OR51B5Q9H339 312 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 TNRC6CQ9HCJ0 1690 aaKnown RBP16.85■□□□□ 0.29
PTPRU-202ENST00000373779 A0A1W2PRU2 124 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 OR6C70A6NIJ9 312 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 RPL10P27635 214 aaKnown RBP16.85■□□□□ 0.29
PTPRU-202ENST00000373779 CD83Q01151 205 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 SMARCD3Q6STE5 483 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 OAFQ86UD1 273 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 KAT2AQ92830 837 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 C1QTNF1Q9BXJ1 281 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 IL36AQ9UHA7 158 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 USP3Q9Y6I4 520 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 MBLAC1A4D2B0 266 aaPredicted RBP16.85■□□□□ 0.29
PTPRU-202ENST00000373779 BCAS1O75363 584 aaPredicted RBP16.85■□□□□ 0.29
PTPRU-202ENST00000373779 OPRL1P41146 370 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 CCR8P51685 355 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 NCS1P62166 190 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 CLEC12AQ5QGZ9 265 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 KIAA1161Q6NSJ0 714 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 NUS1Q96E22 293 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 COMMD9Q9P000 198 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 NOS1APO75052 506 aaPredicted RBP16.85■□□□□ 0.29
PTPRU-202ENST00000373779 CMPK1P30085 196 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 DGKGP49619 791 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 CRHR2Q13324 411 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 TUBB3Q13509 450 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 THOC7Q6I9Y2 204 aaKnown RBP16.85■□□□□ 0.29
PTPRU-202ENST00000373779 ADNP2Q6IQ32 1131 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 PLEKHG7Q6ZR37 379 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 OLIG1Q8TAK6 271 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 CD200R1Q8TD46 325 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 DPH2Q9BQC3 489 aaPredicted RBP16.85■□□□□ 0.29
PTPRU-202ENST00000373779 REEP4Q9H6H4 257 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 ARNT2Q9HBZ2 717 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 ZNF451Q9Y4E5 1061 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 PCDHB11Q9Y5F2 797 aa16.85■□□□□ 0.29
PTPRU-202ENST00000373779 AP1G1O43747 822 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 TLX2O43763 284 aaPredicted RBP16.84■□□□□ 0.29
PTPRU-202ENST00000373779 RETP07949 1114 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 FUT4P22083 530 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 PRDX3P30048 256 aaKnown RBP16.84■□□□□ 0.29
PTPRU-202ENST00000373779 ADRA1AP35348 466 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 DCTP40126 519 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 CDKN1CP49918 316 aaPredicted RBP16.84■□□□□ 0.29
PTPRU-202ENST00000373779 MARCH9Q86YJ5 346 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 LINC00471Q8N535 108 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 ZNF433Q8N7K0 673 aaPredicted RBP16.84■□□□□ 0.29
PTPRU-202ENST00000373779 SUN5Q8TC36 379 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 NETO1Q8TDF5 533 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 KHSRPQ92945 711 aaKnown RBP eCLIP16.84■□□□□ 0.29
PTPRU-202ENST00000373779 ITPKCQ96DU7 683 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 SPATA9Q9BWV2 254 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 GPN1Q9HCN4 374 aaPredicted RBP16.84■□□□□ 0.29
PTPRU-202ENST00000373779 NDOR1Q9UHB4 597 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 IRAK3Q9Y616 596 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 FAM92AA1XBS5 289 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 WASH4PA8MWX3 477 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 M0QZQ0 153 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 ACOT8O14734 319 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 ATE1O95260 518 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 FAUP35544 74 aaKnown RBP16.84■□□□□ 0.29
PTPRU-202ENST00000373779 LIN54Q6MZP7 749 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 AMZ2Q86W34 360 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 ZSWIM9Q86XI8 627 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 PEX5LQ8IYB4 626 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 B4GALT6Q9UBX8 382 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 SEC14L4Q9UDX3 406 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 A0A0G2JN53 185 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 H7C0S8 307 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 COMMD2Q86X83 199 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 TICAM1Q8IUC6 712 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 SNX33Q8WV41 574 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 BARD1Q99728 777 aaKnown RBP16.84■□□□□ 0.29
PTPRU-202ENST00000373779 DLEC1Q9Y238 1755 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 AVPR1BP47901 424 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 EXOC3L2Q2M3D2 409 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 SMU1Q2TAY7 513 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 MGME1Q9BQP7 344 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 MGAT4BQ9UQ53 548 aa16.84■□□□□ 0.29
PTPRU-202ENST00000373779 SLC16A5O15375 505 aa16.83■□□□□ 0.29
PTPRU-202ENST00000373779 B4GAT1O43505 415 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms