RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 BCL10O95999 233 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 NPPBP16860 134 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 ITGA2P17301 1181 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 SERPINB1P30740 379 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 PIGAP37287 484 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 GPR1P46091 355 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 FCHO2Q0JRZ9 810 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 ELAVL3Q14576 367 aaKnown RBP17.4■□□□□ 0.38
CD40-201ENST00000372276 HNRNPA1L2Q32P51 320 aaKnown RBP17.4■□□□□ 0.38
CD40-201ENST00000372276 GTF2IRD2BQ6EKJ0 949 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 ZNF551Q7Z340 670 aaPredicted RBP17.4■□□□□ 0.38
CD40-201ENST00000372276 GTF2IRD2Q86UP8 949 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 CFAP206Q8IYR0 622 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 KRT78Q8N1N4 520 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 C10orf111Q8N326 155 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 IPCEF1Q8WWN9 437 aaPredicted RBP17.4■□□□□ 0.38
CD40-201ENST00000372276 SLC5A11Q8WWX8 675 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 NEIL2Q969S2 332 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 SH3KBP1Q96B97 665 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 DOHHQ9BU89 302 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 CHST8Q9H2A9 424 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 MYNNQ9NPC7 610 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 DYRK4Q9NR20 520 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 KIF17Q9P2E2 1029 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 UTS2RQ9UKP6 389 aa17.4■□□□□ 0.38
CD40-201ENST00000372276 SAMHD1Q9Y3Z3 626 aaKnown RBP17.4■□□□□ 0.38
CD40-201ENST00000372276 A8MVJ9 347 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 ADAMDEC1O15204 470 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 LILRB5O75023 590 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 ANGPTL1O95841 491 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 RPN2P04844 631 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 GSTM5P46439 218 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 RPS13P62277 151 aaKnown RBP17.39■□□□□ 0.38
CD40-201ENST00000372276 TBPL1P62380 186 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 IL5RAQ01344 420 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 NFATC3Q12968 1075 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 GRIN2CQ14957 1233 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 SLC44A4Q53GD3 710 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 ZNF648Q5T619 568 aaPredicted RBP17.39■□□□□ 0.38
CD40-201ENST00000372276 TRIM40Q6P9F5 258 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 NXPE4Q6UWF7 544 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 GRASPQ7Z6J2 395 aaPredicted RBP17.39■□□□□ 0.38
CD40-201ENST00000372276 TMPRSS11BQ86T26 416 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 OXR1Q8N573 874 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 OR4A15Q8NGL6 344 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 OR2L2Q8NH16 312 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 CDC26Q8NHZ8 85 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 FAM81AQ8TBF8 368 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 CCDC177Q9NQR7 707 aaPredicted RBP17.39■□□□□ 0.38
CD40-201ENST00000372276 TBC1D23Q9NUY8 699 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 GMPPBQ9Y5P6 360 aa17.39■□□□□ 0.38
CD40-201ENST00000372276 DNMT3AQ9Y6K1 912 aaPredicted RBP17.39■□□□□ 0.38
CD40-201ENST00000372276 NOTCH4Q99466 2003 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 NUP210Q8TEM1 1887 aaPredicted RBP17.39■□□□□ 0.37
CD40-201ENST00000372276 MYO1GB0I1T2 1018 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 C5orf67F2Z3F1 127 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 LZTS3O60299 673 aaPredicted RBP17.39■□□□□ 0.37
CD40-201ENST00000372276 KRT75O95678 551 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 IL7RP16871 459 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 PRKACGP22612 351 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 KELP23276 732 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 CXCR2P25025 360 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 IRS1P35568 1242 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 EMP3P54852 163 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 SLC14A1Q13336 389 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 PDE7AQ13946 482 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 ARHGAP19Q14CB8 494 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 HKDC1Q2TB90 917 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 CTU2Q2VPK5 515 aaKnown RBP17.39■□□□□ 0.37
CD40-201ENST00000372276 FNDC3BQ53EP0 1204 aaKnown RBP17.39■□□□□ 0.37
CD40-201ENST00000372276 KIAA1614Q5VZ46 1190 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 FAHD1Q6P587 224 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 PSRC1Q6PGN9 363 aaPredicted RBP17.39■□□□□ 0.37
CD40-201ENST00000372276 LCTLQ6UWM7 567 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 ANKRD13BQ86YJ7 626 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 TRAPPC5Q8IUR0 188 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 CLECL1Q8IZS7 167 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 HS3ST5Q8IZT8 346 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 OR52N2Q8NGI0 321 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.39■□□□□ 0.37
CD40-201ENST00000372276 RAD51AP1Q96B01 352 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 PITHD1Q9GZP4 211 aaPredicted RBP17.39■□□□□ 0.37
CD40-201ENST00000372276 LHPPQ9H008 270 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 TMEM38AQ9H6F2 299 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 DMRT3Q9NQL9 472 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 KRT84Q9NSB2 600 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 PDP1Q9P0J1 537 aaPredicted RBP17.39■□□□□ 0.37
CD40-201ENST00000372276 SH3BP4Q9P0V3 963 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 DEC1Q9P2X7 70 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 ENOPH1Q9UHY7 261 aa17.39■□□□□ 0.37
CD40-201ENST00000372276 NDRG4Q9ULP0 352 aaKnown RBP17.39■□□□□ 0.37
CD40-201ENST00000372276 DOCK6Q96HP0 2047 aa17.38■□□□□ 0.37
CD40-201ENST00000372276 A0A1B0GVG6 124 aa17.38■□□□□ 0.37
CD40-201ENST00000372276 SH3PXD2BA1X283 911 aa17.38■□□□□ 0.37
CD40-201ENST00000372276 ZNF99A8MXY4 864 aaPredicted RBP17.38■□□□□ 0.37
CD40-201ENST00000372276 TLL1O43897 1013 aa17.38■□□□□ 0.37
CD40-201ENST00000372276 GPR37L1O60883 481 aa17.38■□□□□ 0.37
CD40-201ENST00000372276 PDHA2P29803 388 aa17.38■□□□□ 0.37
CD40-201ENST00000372276 POLR2IP36954 125 aaKnown RBP17.38■□□□□ 0.37
CD40-201ENST00000372276 DAPP51397 102 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms