RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 CYTH2Q99418 400 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 TRIM51Q9BSJ1 452 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 VN1R1Q9GZP7 353 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 ANKHQ9HCJ1 492 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 NSMCE4AQ9NXX6 385 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 ZFATQ9P243 1243 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 DOPEY1Q5JWR5 2465 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 TRBC2A0A5B9 178 aa16.78■□□□□ 0.28
HDDC3-201ENST00000330334 FEZF1A0PJY2 475 aa16.78■□□□□ 0.28
HDDC3-201ENST00000330334 DYTNA2CJ06 578 aa16.78■□□□□ 0.28
HDDC3-201ENST00000330334 EFCAB8A8MWE9 144 aa16.78■□□□□ 0.28
HDDC3-201ENST00000330334 SLC35G6P0C7Q6 338 aa16.78■□□□□ 0.28
HDDC3-201ENST00000330334 ZNF37AP17032 561 aaPredicted RBP16.78■□□□□ 0.28
HDDC3-201ENST00000330334 EFNA3P52797 238 aa16.78■□□□□ 0.28
HDDC3-201ENST00000330334 EEF1A2Q05639 463 aaKnown RBP16.78■□□□□ 0.28
HDDC3-201ENST00000330334 CDC16Q13042 620 aa16.78■□□□□ 0.28
HDDC3-201ENST00000330334 PDIA2Q13087 525 aaKnown RBP16.78■□□□□ 0.28
HDDC3-201ENST00000330334 HERC3Q15034 1050 aa16.78■□□□□ 0.28
HDDC3-201ENST00000330334 PPP1R3AQ16821 1122 aa16.78■□□□□ 0.28
HDDC3-201ENST00000330334 NIPAL1Q6NVV3 410 aa16.78■□□□□ 0.28
HDDC3-201ENST00000330334 SBSNQ6UWP8 590 aa16.78■□□□□ 0.28
HDDC3-201ENST00000330334 AFAP1L2Q8N4X5 818 aa16.78■□□□□ 0.28
HDDC3-201ENST00000330334 NKAPQ8N5F7 415 aaKnown RBP16.78■□□□□ 0.28
HDDC3-201ENST00000330334 TBC1D19Q8N5T2 526 aa16.78■□□□□ 0.28
HDDC3-201ENST00000330334 KCT2Q8NC54 265 aa16.78■□□□□ 0.28
HDDC3-201ENST00000330334 BRIX1Q8TDN6 353 aaKnown RBP16.78■□□□□ 0.28
HDDC3-201ENST00000330334 FAR1Q8WVX9 515 aa16.78■□□□□ 0.28
HDDC3-201ENST00000330334 ALKBH8Q96BT7 664 aaKnown RBP16.78■□□□□ 0.28
HDDC3-201ENST00000330334 RNF32Q9H0A6 362 aa16.78■□□□□ 0.28
HDDC3-201ENST00000330334 ICE1Q9Y2F5 2266 aa16.78■□□□□ 0.28
HDDC3-201ENST00000330334 WFS1O76024 890 aa16.77■□□□□ 0.28
HDDC3-201ENST00000330334 AHRP35869 848 aa16.77■□□□□ 0.28
HDDC3-201ENST00000330334 AGTR2P50052 363 aa16.77■□□□□ 0.28
HDDC3-201ENST00000330334 CDKL1Q00532 357 aa16.77■□□□□ 0.28
HDDC3-201ENST00000330334 ELOAQ14241 798 aaKnown RBP16.77■□□□□ 0.28
HDDC3-201ENST00000330334 FAAH2Q6GMR7 532 aa16.77■□□□□ 0.28
HDDC3-201ENST00000330334 TMEM207Q6UWW9 146 aa16.77■□□□□ 0.28
HDDC3-201ENST00000330334 CYS1Q717R9 158 aa16.77■□□□□ 0.28
HDDC3-201ENST00000330334 PRSS41Q7RTY9 318 aa16.77■□□□□ 0.28
HDDC3-201ENST00000330334 ANKMY2Q8IV38 441 aa16.77■□□□□ 0.28
HDDC3-201ENST00000330334 FBXO36Q8NEA4 188 aa16.77■□□□□ 0.28
HDDC3-201ENST00000330334 PYCR2Q96C36 320 aa16.77■□□□□ 0.28
HDDC3-201ENST00000330334 CNDP1Q96KN2 507 aa16.77■□□□□ 0.28
HDDC3-201ENST00000330334 OR1F2PQ96R84 312 aa16.77■□□□□ 0.28
HDDC3-201ENST00000330334 MACROD1Q9BQ69 325 aa16.77■□□□□ 0.28
HDDC3-201ENST00000330334 MCMBPQ9BTE3 642 aa16.77■□□□□ 0.28
HDDC3-201ENST00000330334 CLK4Q9HAZ1 481 aaKnown RBP16.77■□□□□ 0.28
HDDC3-201ENST00000330334 PTGFRNQ9P2B2 879 aa16.77■□□□□ 0.28
HDDC3-201ENST00000330334 C19orf25Q9UFG5 118 aaPredicted RBP16.77■□□□□ 0.28
HDDC3-201ENST00000330334 PSAT1Q9Y617 370 aa16.77■□□□□ 0.28
HDDC3-201ENST00000330334 TRAV17A0A0B4J275 112 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 SGK494L7N484 410 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 OR1F1O43749 312 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 STATHP02808 62 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 EDN3P14138 238 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 IL1RNP18510 177 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 XCR1P46094 333 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 RPL21P46778 160 aaKnown RBP16.76■□□□□ 0.27
HDDC3-201ENST00000330334 HNMTP50135 292 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 TNFSF10P50591 281 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 PGGT1BP53609 377 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 SKP1P63208 163 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 ARG2P78540 354 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 CSHL1Q14406 222 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 INAQ16352 499 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 PLAG1Q6DJT9 500 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 CPEB2Q7Z5Q1 589 aaKnown RBP16.76■□□□□ 0.27
HDDC3-201ENST00000330334 PDSS2Q86YH6 399 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 PLPP5Q8NEB5 264 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 CATSPER1Q8NEC5 780 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 NT5CQ8TCD5 201 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 GRHL3Q8TE85 626 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 SLC5A11Q8WWX8 675 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 VPS39Q96JC1 886 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 KRT12Q99456 494 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 TRIM31Q9BZY9 425 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 RHOJQ9H4E5 214 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 POPDC3Q9HBV1 291 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 WHRNQ9P202 907 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 PLEKHB1Q9UF11 243 aaPredicted RBP16.76■□□□□ 0.27
HDDC3-201ENST00000330334 ZFP69BQ9UJL9 534 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 PYCARDQ9ULZ3 195 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 SLC5A6Q9Y289 635 aa16.76■□□□□ 0.27
HDDC3-201ENST00000330334 UNC79Q9P2D8 2635 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 FAM95CA0A1B0GW59 222 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 FAM187AA6NFU0 413 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 FANCGO15287 622 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 JRKO75564 520 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 GUCA1CO95843 209 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 SCTRP47872 440 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 TAS2R39P59534 338 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 FASTKD3Q14CZ7 662 aaKnown RBP16.75■□□□□ 0.27
HDDC3-201ENST00000330334 MINDY4Q4G0A6 757 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 MAATS1Q7Z4T9 603 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 SIRT6Q8N6T7 355 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 ZNF740Q8NDX6 193 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 OR1N1Q8NGS0 311 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 NEIL2Q969S2 332 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 ERP44Q9BS26 406 aa16.75■□□□□ 0.27
HDDC3-201ENST00000330334 PELI2Q9HAT8 420 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms