RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 FCGR2BP31994 310 aaPredicted RBP0.81□□□□□ -2.28
CEP290-208ENST00000604024 FCGR2CP31995 323 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 RPL9P32969 192 aaKnown RBP0.81□□□□□ -2.28
CEP290-208ENST00000604024 RGS2P41220 211 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 LIMK1P53667 647 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 TPD52P55327 224 aaPredicted RBP0.81□□□□□ -2.28
CEP290-208ENST00000604024 CUL3Q13618 768 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 SIX1Q15475 284 aaPredicted RBP0.81□□□□□ -2.28
CEP290-208ENST00000604024 PHLDA2Q53GA4 152 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 FAM114A1Q8IWE2 563 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 ENTHD1Q8IYW4 607 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 GUF1Q8N442 669 aaKnown RBP0.81□□□□□ -2.28
CEP290-208ENST00000604024 PDILTQ8N807 584 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 TSPAN14Q8NG11 270 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 OR5M9Q8NGP3 310 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 FRAT1Q92837 279 aaPredicted RBP0.81□□□□□ -2.28
CEP290-208ENST00000604024 SLCO4A1Q96BD0 722 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 FAF2Q96CS3 445 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 UBAC1Q9BSL1 405 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 HES7Q9BYE0 225 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 LRRCC1Q9C099 1032 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 SP140LQ9H930 580 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 Q9N2K0 584 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP0.81□□□□□ -2.28
CEP290-208ENST00000604024 KRT84Q9NSB2 600 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 CUTCQ9NTM9 273 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 HACD3Q9P035 362 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 R4GN57 208 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 ARHGEF11O15085 1522 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 PDS5BQ9NTI5 1447 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 TOP2BQ02880 1626 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 PIP5K1CO60331 668 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 PSMB10P40306 273 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 MECOMQ03112 1051 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 TLE4Q04727 773 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 TRAP1Q12931 704 aaKnown RBP0.81□□□□□ -2.28
CEP290-208ENST00000604024 HSPB3Q12988 150 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 BIRC2Q13490 618 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 BAATQ14032 418 aaPredicted RBP0.81□□□□□ -2.28
CEP290-208ENST00000604024 ZRSR2Q15696 482 aaKnown RBP0.81□□□□□ -2.28
CEP290-208ENST00000604024 GPR33Q49SQ1 333 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 SMAP1Q8IYB5 467 aaPredicted RBP0.81□□□□□ -2.28
CEP290-208ENST00000604024 RNF175Q8N4F7 328 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 ESX1Q8N693 406 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 THAP8Q8NA92 274 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 ELSPBP1Q96BH3 223 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 SIGLEC12Q96PQ1 595 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 CTRCQ99895 268 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 FNDC11Q9BVV2 318 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 TBC1D13Q9NVG8 400 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 Q9UF83 564 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 AUP1Q9Y679 476 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 NOTCH1P46531 2555 aa0.81□□□□□ -2.28
CEP290-208ENST00000604024 SYNJ2O15056 1496 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 A0A1B0GTH9 108 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 hCG_38984A0A1B0GV85 526 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 FEZF1A0PJY2 475 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 CYTIPO60759 359 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 DDHD2O94830 711 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 IGLV1-47P01700 117 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 KRT3P12035 628 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 SKILP12757 684 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 TRIM21P19474 475 aaKnown RBP0.8□□□□□ -2.28
CEP290-208ENST00000604024 ASCL1P50553 236 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 MAMLD1Q13495 774 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 RASA2Q15283 850 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 TBCEQ15813 527 aaPredicted RBP0.8□□□□□ -2.28
CEP290-208ENST00000604024 ISXQ2M1V0 245 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 PLEKHS1Q5SXH7 462 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 ATP1A1-AS1Q5TC04 95 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 KIAA0930Q6ICG6 404 aaPredicted RBP0.8□□□□□ -2.28
CEP290-208ENST00000604024 MACC1Q6ZN28 852 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 IL17RELQ6ZVW7 336 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 SLC24A5Q71RS6 500 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 C5orf24Q7Z6I8 188 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 PXKQ7Z7A4 578 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 CCDC60Q8IWA6 550 aaPredicted RBP0.8□□□□□ -2.28
CEP290-208ENST00000604024 RYBPQ8N488 228 aaPredicted RBP0.8□□□□□ -2.28
CEP290-208ENST00000604024 PCYOX1LQ8NBM8 494 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 OR9Q2Q8NGE9 314 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 METTL21AQ8WXB1 218 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 SPACA9Q96E40 222 aaPredicted RBP0.8□□□□□ -2.28
CEP290-208ENST00000604024 ALKBH3Q96Q83 286 aaPredicted RBP0.8□□□□□ -2.28
CEP290-208ENST00000604024 ACTL8Q9H568 366 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 KLK11Q9UBX7 282 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 UBQLN2Q9UHD9 624 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 CRYL1Q9Y2S2 319 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 TNRQ92752 1358 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 SCO2O43819 266 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 SNX3O60493 162 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 FOXH1O75593 365 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 DARSP14868 501 aaKnown RBP0.8□□□□□ -2.28
CEP290-208ENST00000604024 TM4SF1P30408 202 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 MATKP42679 507 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 SLC1A4P43007 532 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 TUBP50607 506 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 CCR9P51686 369 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 SUOXP51687 545 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 ZNF75DP51815 510 aa0.8□□□□□ -2.28
CEP290-208ENST00000604024 ZNF133P52736 654 aaPredicted RBP0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 454.8 ms