RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 TEX47Q8TBZ9 253 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 KLHL6Q8WZ60 621 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 KCNN1Q92952 543 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 C11orf24Q96F05 449 aaPredicted RBP10.21□□□□□ -0.78
USB1-212ENST00000566082 DUS3LQ96G46 650 aaKnown RBP10.21□□□□□ -0.78
USB1-212ENST00000566082 FRMD6Q96NE9 622 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 OR2B2Q9GZK3 357 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 MAGIXQ9H6Y5 334 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 TMEM30AQ9NV96 361 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 SPEF1Q9Y4P9 236 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 CLCA3PQ9Y6N3 262 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 TLR4O00206 839 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 ARNTLO00327 626 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 SEMA3DO95025 777 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 DHFRP00374 187 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 TGFB1P01137 390 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 SLC2A2P11168 524 aaPredicted RBP10.2□□□□□ -0.78
USB1-212ENST00000566082 NOS3P29474 1203 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 SMIM11AP58511 58 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 MCCD1P59942 119 aaPredicted RBP10.2□□□□□ -0.78
USB1-212ENST00000566082 AQP6Q13520 282 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 WSCD2Q2TBF2 565 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 CTU2Q2VPK5 515 aaKnown RBP10.2□□□□□ -0.78
USB1-212ENST00000566082 STEAP3Q658P3 488 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 CXorf57Q6NSI4 855 aaKnown RBP10.2□□□□□ -0.78
USB1-212ENST00000566082 SLC24A5Q71RS6 500 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 DEFB128Q7Z7B8 93 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 MMAAQ8IVH4 418 aaKnown RBP10.2□□□□□ -0.78
USB1-212ENST00000566082 TTC9BQ8N6N2 239 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 ZNF548Q8NEK5 533 aaPredicted RBP10.2□□□□□ -0.78
USB1-212ENST00000566082 ZNF607Q96SK3 696 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 ZNF282Q9UDV7 671 aaPredicted RBP10.2□□□□□ -0.78
USB1-212ENST00000566082 TRIP11Q15643 1979 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 A0A0U1RQF3 1178 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 FAM92AA1XBS5 289 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 CPNE6O95741 557 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 ATXN1LP0C7T5 689 aaKnown RBP10.2□□□□□ -0.78
USB1-212ENST00000566082 ZNF24P17028 368 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 JUNBP17275 347 aaPredicted RBP10.2□□□□□ -0.78
USB1-212ENST00000566082 CSTF2P33240 577 aaKnown RBP eCLIP10.2□□□□□ -0.78
USB1-212ENST00000566082 CA5AP35218 305 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 RPL3P39023 403 aaKnown RBP10.2□□□□□ -0.78
USB1-212ENST00000566082 CLDN8P56748 225 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 CDK6Q00534 326 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 HSPB3Q12988 150 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 PPIGQ13427 754 aaKnown RBP eCLIP10.2□□□□□ -0.789e-7■■□□□ 11.6
USB1-212ENST00000566082 UGT3A2Q3SY77 523 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 RUNDC3AQ59EK9 446 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 RAB41Q5JT25 222 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 GDF6Q6KF10 455 aaPredicted RBP10.2□□□□□ -0.78
USB1-212ENST00000566082 ASB18Q6ZVZ8 466 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 ZNF280BQ86YH2 543 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 DPP10Q8N608 796 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 SLC5A8Q8N695 610 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 CNDP2Q96KP4 475 aaKnown RBP10.2□□□□□ -0.78
USB1-212ENST00000566082 FAM129BQ96TA1 746 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 HEBP1Q9NRV9 189 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 PGAP2Q9UHJ9 254 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 SLX4Q8IY92 1834 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 SHROOM3Q8TF72 1996 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 SLC38A8A6NNN8 435 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 FAM47E-STBD1D6RA91 191 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 ORC5O43913 435 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 SULT1C4O75897 302 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 GABARAPO95166 117 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 URODP06132 367 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 C8GP07360 202 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 PTX3P26022 381 aaPredicted RBP10.2□□□□□ -0.78
USB1-212ENST00000566082 RYKP34925 604 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 TGFBR1P36897 503 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 IFNGR2P38484 337 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 CSKP41240 450 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 GNG2P59768 71 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 ABATP80404 500 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 LIPKQ5VXJ0 399 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 PNCKQ6P2M8 343 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 NPAS3Q8IXF0 933 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 TCEANCQ8N8B7 351 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 FAM83FQ8NEG4 500 aaPredicted RBP10.2□□□□□ -0.78
USB1-212ENST00000566082 EXOSC8Q96B26 276 aaKnown RBP10.2□□□□□ -0.78
USB1-212ENST00000566082 TADA1Q96BN2 335 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 MAGEB10Q96LZ2 347 aaPredicted RBP10.2□□□□□ -0.78
USB1-212ENST00000566082 CEP295NLQ96MC4 621 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 BRINP2Q9C0B6 783 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 MED28Q9H204 178 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 IFT52Q9Y366 437 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 BOLA1Q9Y3E2 137 aa10.2□□□□□ -0.78
USB1-212ENST00000566082 ATAD5Q96QE3 1844 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 FAM172BPA6NC97 362 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 TMEM221A6NGB7 291 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 E2F3O00716 465 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 CTDSP2O14595 271 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 TLX2O43763 284 aaPredicted RBP10.19□□□□□ -0.78
USB1-212ENST00000566082 ASGR1P07306 291 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 MYL9P24844 172 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 CLCN4P51793 760 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 HNRNPFP52597 415 aaKnown RBP10.19□□□□□ -0.78
USB1-212ENST00000566082 FCGRTP55899 365 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 HNRNPA0Q13151 305 aaKnown RBP10.19□□□□□ -0.78
USB1-212ENST00000566082 ANGPT1Q15389 498 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms