RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 AIF1LQ9BQI0 150 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 EHD1Q9H4M9 534 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 CUTCQ9NTM9 273 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 WDR70Q9NW82 654 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 GEMIN8Q9NWZ8 242 aaKnown RBP11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 EMCNQ9ULC0 261 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 GRID1Q9ULK0 1009 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 TMCO1Q9UM00 188 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 SRPK3Q9UPE1 567 aa11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 RUVBL1Q9Y265 456 aaKnown RBP11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 TNPO3Q9Y5L0 923 aaKnown RBP11.4□□□□□ -0.58
RABGGTA-218ENST00000560777 A8MT66 165 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 STX16-NPEPL1H3BU86 382 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 E2F3O00716 465 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 TXNDC9O14530 226 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 STX16O14662 325 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 DLX3O60479 287 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 GLRA3O75311 464 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 H2AFYO75367 372 aaKnown RBP11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 WFS1O76024 890 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 STATHP02808 62 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 CAPN1P07384 714 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 LIFP15018 202 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 EPB42P16452 691 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 WT1P19544 449 aaPredicted RBP11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 TCN2P20062 427 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 CD22P20273 847 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 ITGAXP20702 1163 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 EEF1DP29692 281 aaKnown RBP11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 AHRP35869 848 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 CASP2P42575 452 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 SCTRP47872 440 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 EMP3P54852 163 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 SNRPNP63162 240 aaKnown RBP11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 REEP5Q00765 189 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 DOC2AQ14183 400 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 E2F2Q14209 437 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 RBBP5Q15291 538 aaKnown RBP11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 KRT71Q3SY84 523 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 XKR6Q5GH73 641 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 DTWD1Q8N5C7 304 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 BANPQ8N9N5 519 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 ANKRD53Q8N9V6 530 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 TTC29Q8NA56 475 aaPredicted RBP11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 PROKR1Q8TCW9 393 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 CT55Q8WUE5 264 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 SLC13A3Q8WWT9 602 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 ZBTB9Q96C00 473 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 MOCOSQ96EN8 888 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 C10orf90Q96M02 699 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 DPH2Q9BQC3 489 aaPredicted RBP11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 CHST8Q9H2A9 424 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 C12orf65Q9H3J6 166 aaKnown RBP11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 NT5DC2Q9H857 520 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 TXLNGQ9NUQ3 528 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 COPG2Q9UBF2 871 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 ZFP69BQ9UJL9 534 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 CROTQ9UKG9 612 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 ZNF490Q9ULM2 529 aaPredicted RBP11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 CFAP47Q6ZTR5 3102 aa11.39□□□□□ -0.59
RABGGTA-218ENST00000560777 USP24Q9UPU5 2620 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 A0A1B0GX78 115 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 G3V2L1 256 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 COPEO14579 308 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 DSCR3O14972 297 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 PLIN3O60664 434 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 ONECUT2O95948 504 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 PROCP04070 461 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 CREB1P16220 341 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 TAC1P20366 129 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 AGXTP21549 392 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 ATP5F1P24539 256 aaPredicted RBP11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 CXCR2P25025 360 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 DLSTP36957 453 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 DCDP81605 110 aaKnown RBP11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 IRF8Q02556 426 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 CHIT1Q13231 466 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 GTF2H2Q13888 395 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 SLBPQ14493 270 aaKnown RBP eCLIP11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 TBCCQ15814 346 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 NKAIN1Q4KMZ8 207 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 CEP85LQ5SZL2 805 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 GARNL3Q5VVW2 1013 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 BROXQ5VW32 411 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 GTF2H2CQ6P1K8 395 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 LRIG3Q6UXM1 1119 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 TMIGD1Q6UXZ0 262 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 GOLGA7Q7Z5G4 137 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 ASPGQ86U10 573 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 SRRM1Q8IYB3 904 aaKnown RBP11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 TBC1D19Q8N5T2 526 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 KCT2Q8NC54 265 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 CAMKVQ8NCB2 501 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 MYRIPQ8NFW9 859 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 PTCD3Q96EY7 689 aaKnown RBP11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 RUFY1Q96T51 708 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 C1QTNF3Q9BXJ4 246 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 IPPKQ9H8X2 491 aa11.38□□□□□ -0.59
RABGGTA-218ENST00000560777 GPN2Q9H9Y4 310 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms