RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	CLEC4F	Q8N1N0	589 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	CBR4	Q8N4T8	237 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	OXR1	Q8N573	874 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	TRIML2	Q8N7C3	387 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	PLA2G15	Q8NCC3	412 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZNF548	Q8NEK5	533 aa	Predicted RBP	10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	OR4A15	Q8NGL6	344 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	SMPDL3A	Q92484	453 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	TFG	Q92734	400 aa	Predicted RBP	10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	PPCDC	Q96CD2	204 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	COX14	Q96I36	57 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	REXO5	Q96IC2	774 aa	Known RBP	10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	FCRL1	Q96LA6	429 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	QRFPR	Q96P65	431 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	PHF12	Q96QT6	1004 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	OR4K3	Q96R72	315 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	FERD3L	Q96RJ6	166 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	CHID1	Q9BWS9	393 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	PAIP1	Q9H074	479 aa	Known RBP	10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	RAD21L1	Q9H4I0	556 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	MAGIX	Q9H6Y5	334 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	RPF2	Q9H7B2	306 aa	Known RBP	10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	RMI1	Q9H9A7	625 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	PELI2	Q9HAT8	420 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	DMRT3	Q9NQL9	472 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	FBXL12	Q9NXK8	326 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	RPS6KA6	Q9UK32	745 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	PPT2	Q9UMR5	302 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	OAZ3	Q9UMX2	235 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	SAMD4A	Q9UPU9	718 aa	Known RBP	10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	PRKAB1	Q9Y478	270 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	COL4A2	P08572	1712 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	CCDC88C	Q9P219	2028 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006		A6NHS1	94 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	PDZK1P1	A8MUH7	402 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	FOXE1	O00358	373 aa	Predicted RBP	10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	CLOCK	O15516	846 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	SH3BP5	O60239	455 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	RNGTT	O60942	597 aa	Known RBP	10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	CCNDBP1	O95273	360 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	KLF8	O95600	359 aa	Predicted RBP	10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZNF682	O95780	498 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	RET	P07949	1114 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	CD22	P20273	847 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	TACR1	P25103	407 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	DRD3	P35462	400 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	SOAT1	P35610	550 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	PIK3CB	P42338	1070 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	SOX9	P48436	509 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	CCT8	P50990	548 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	CCR8	P51685	355 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	CLCNKA	P51800	687 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	C21orf58	P58505	322 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	PRKCQ	Q04759	706 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	PCDH1	Q08174	1060 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	VAC14	Q08AM6	782 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	GRSF1	Q12849	480 aa	Known RBP eCLIP	10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	WSCD2	Q2TBF2	565 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	GTDC1	Q4AE62	458 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	LRRC23	Q53EV4	343 aa	Predicted RBP	10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	C2orf27A	Q580R0	203 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	IER5L	Q5T953	404 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	PPP4R4	Q6NUP7	873 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	UGT2A3	Q6UWM9	527 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	CHST15	Q7LFX5	561 aa	Predicted RBP	10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	PAGE2	Q7Z2X7	111 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	ADCK2	Q7Z695	626 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	PHACTR4	Q8IZ21	702 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	EID3	Q8N140	333 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	SVOPL	Q8N434	492 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	RNF175	Q8N4F7	328 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	PRSS33	Q8NF86	280 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	OR7A2P	Q8NGA2	310 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	OR5AR1	Q8NGP9	310 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	KLK6	Q92876	244 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	MIEF2	Q96C03	454 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	WDR34	Q96EX3	536 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	RMND5B	Q96G75	393 aa	Predicted RBP	10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	C12orf66	Q96MD2	445 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	PHOX2B	Q99453	314 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	TIMM29	Q9BSF4	260 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	INPP5K	Q9BT40	448 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZDHHC5	Q9C0B5	715 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	OR52A5	Q9H2C5	316 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	GORASP2	Q9H8Y8	452 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	PREB	Q9HCU5	417 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	MIEF1	Q9NQG6	463 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	SMPD3	Q9NY59	655 aa	Predicted RBP	10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	NDUFA13	Q9P0J0	144 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	SH3BP4	Q9P0V3	963 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	SPAST	Q9UBP0	616 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZNF282	Q9UDV7	671 aa	Predicted RBP	10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	PLAGL1	Q9UM63	463 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	SCML1	Q9UN30	329 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	USP22	Q9UPT9	525 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	PCDHB14	Q9Y5E9	798 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	AK5	Q9Y6K8	562 aa		10.37	□□□□□ -0.75
SPIDR-222	ENST00000524006	SPTBN4	Q9H254	2564 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	SNRNP200	O75643	2136 aa	Known RBP	10.36	□□□□□ -0.75

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