RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 SHFQ7M4L6 423 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 SPATA19Q7Z5L4 167 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 PHLDB2Q86SQ0 1253 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 NDUFAF2Q8N183 169 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 TRIML1Q8N9V2 468 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 RSPH1Q8WYR4 309 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 SLAMF9Q96A28 289 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 MIB2Q96AX9 1013 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 EME1Q96AY2 570 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 LRFN5Q96NI6 719 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 WDR77Q9BQA1 342 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 TMEM175Q9BSA9 504 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 MSTO1Q9BUK6 570 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 ZNF747Q9BV97 191 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 WNT5BQ9H1J7 359 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 AZI2Q9H6S1 392 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 ESRP2Q9H6T0 727 aaKnown RBP4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 EQTNQ9NQ60 294 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 ABCB8Q9NUT2 735 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 TMEM51Q9NW97 253 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 DPP3Q9NY33 737 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 VPS18Q9P253 973 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 GRIP1Q9Y3R0 1128 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 TACC2O95359 2948 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 PLXND1Q9Y4D7 1925 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 NBEAL2Q6ZNJ1 2754 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 IGKV6D-41A0A0C4DH26 115 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 GTPBP10A4D1E9 387 aaKnown RBP4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 MEI4A8MW99 385 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 KDM4EB2RXH2 506 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 MS4A18H0YCH9 400 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 DDX39AO00148 427 aaKnown RBP4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 PPP6CO00743 305 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 CNOT3O75175 753 aaKnown RBP4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 RTN2O75298 545 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 DDHD2O94830 711 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 ZWINTO95229 277 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 PNPP00491 289 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 VTNP04004 478 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 VIMP08670 466 aaKnown RBP4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 NHLRC4P0CG21 123 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 ZNF883P0CG24 379 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 CDK4P11802 303 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 CDC25CP30307 473 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 STX2P32856 288 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 PPP3CCP48454 512 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 ENTPD1P49961 510 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 ZP1P60852 638 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 SNRPEP62304 92 aaKnown RBP4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 CDK3Q00526 305 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 ZNF674Q2M3X9 581 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 HLA-BQ31612 363 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 MMEL1Q495T6 779 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 TMEM119Q4V9L6 283 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 NHSL2Q5HYW2 709 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 GLRA4Q5JXX5 417 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 MPP7Q5T2T1 576 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 C6orf163Q5TEZ5 329 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 PAPD7Q5XG87 772 aaKnown RBP4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 TMEM198Q66K66 360 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 DPY19L2P1Q6NXN4 242 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 PAPD4Q6PIY7 484 aaKnown RBP4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 FAM198BQ6UWH4 519 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 SUSD1Q6UWL2 747 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 SLC36A4Q6YBV0 504 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 SPNS3Q6ZMD2 512 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 PIWIL3Q7Z3Z3 882 aaKnown RBP4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 ADIPOR2Q86V24 386 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 LSMEM2Q8N112 164 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 ELMOD1Q8N336 334 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 FBXO39Q8N4B4 442 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 CARNMT1Q8N4J0 409 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 METTL13Q8N6R0 699 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 EMC1Q8N766 993 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 MOSPD2Q8NHP6 518 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 BBS10Q8TAM1 723 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 PPP4R1Q8TF05 950 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 TMEM174Q8WUU8 243 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 MR1Q95460 341 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 TAAR8Q969N4 342 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 ERGIC1Q969X5 290 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 SGF29Q96ES7 293 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 MBOAT7Q96N66 472 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 CCNL2Q96S94 520 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 P2RY13Q9BPV8 354 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 TRMOQ9BU70 441 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 ST6GALNAC4Q9H4F1 302 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 CNOT10Q9H9A5 744 aaKnown RBP4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 OR6C3Q9NZP0 311 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 CACNG4Q9UBN1 327 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 MOSPD1Q9UJG1 213 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 FRMD4BQ9Y2L6 1034 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 KIAA1549LQ6ZVL6 1849 aa4.53□□□□□ -1.68
HMGB1P23-201ENST00000518743 MN1Q10571 1320 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 TMEM131Q92545 1883 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 DIDO1Q9BTC0 2240 aaKnown RBP4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 ESYT2A0FGR8 921 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 PRRG1O14668 218 aa4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 TRDMT1O14717 391 aaKnown RBP4.52□□□□□ -1.69
HMGB1P23-201ENST00000518743 SLC16A5O15375 505 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms