RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 PCDHGC4Q9Y5F7 938 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 ACTL7AQ9Y615 435 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 SCN8AQ9UQD0 1980 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 TRPM7Q96QT4 1865 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 H3BNC9 293 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 TNFRSF11BO00300 401 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 INPPL1O15357 1258 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 ITGB1P05556 798 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 OR4Q2P0C623 313 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 CBSLP0DN79 551 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 AMD1P17707 334 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 CBSP35520 551 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 CRYBA2P53672 197 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 RACK1P63244 317 aaKnown RBP17.15■□□□□ 0.34
NUP54-205ENST00000507257 ASAH1Q13510 395 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 TEAD4Q15561 434 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 MACC1Q6ZN28 852 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 Q6ZPB1 254 aaPredicted RBP17.15■□□□□ 0.34
NUP54-205ENST00000507257 SERPINA9Q86WD7 417 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 L3MBTL4Q8NA19 623 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 OR10G2Q8NGC3 310 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 FBXO32Q969P5 355 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 APOL5Q9BWW9 433 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 PCDHB11Q9Y5F2 797 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 TRBV5-4A0A0C4DH59 114 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 TMEM229AB2RXF0 380 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 SCAMP3O14828 347 aaKnown RBP17.15■□□□□ 0.34
NUP54-205ENST00000507257 B3GALT4O96024 378 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 MYCP01106 439 aaPredicted RBP17.15■□□□□ 0.34
NUP54-205ENST00000507257 ANXA5P08758 320 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 CHMP24386 653 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 MLLT3P42568 568 aaPredicted RBP17.15■□□□□ 0.34
NUP54-205ENST00000507257 GPR15P49685 360 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 RHAGQ02094 409 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 CCDC58Q4VC31 144 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 SDHAF4Q5VUM1 108 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 NCEH1Q6PIU2 408 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 TSEN54Q7Z6J9 526 aaKnown RBP17.15■□□□□ 0.34
NUP54-205ENST00000507257 NLRP8Q86W28 1048 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 RDH10Q8IZV5 341 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 C1orf52Q8N6N3 182 aaKnown RBP17.15■□□□□ 0.34
NUP54-205ENST00000507257 KLHDC9Q8NEP7 349 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 LKAAEAR1Q8TD35 194 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 ASB15Q8WXK1 588 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 NEDD4LQ96PU5 975 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 SRRQ9GZT4 340 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 ELOVL6Q9H5J4 265 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 RUBCNLQ9H714 662 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 AMBNQ9NP70 447 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 CPA4Q9UI42 421 aa17.15■□□□□ 0.34
NUP54-205ENST00000507257 A0A0U1RQF3 1178 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 IQCMA0A1B0GVH7 501 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 EIF3FO00303 357 aaPredicted RBP17.14■□□□□ 0.33
NUP54-205ENST00000507257 PDHXO00330 501 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 AP3D1O14617 1153 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 FZD6O60353 706 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 TLR5O60602 858 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 SLC25A14O95258 325 aaPredicted RBP17.14■□□□□ 0.33
NUP54-205ENST00000507257 ALPPP05187 535 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 RPLP2P05387 115 aaKnown RBP17.14■□□□□ 0.33
NUP54-205ENST00000507257 HMBSP08397 361 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 MZF1P28698 734 aaPredicted RBP17.14■□□□□ 0.33
NUP54-205ENST00000507257 CPSF6Q16630 551 aaKnown RBP eCLIP17.14■□□□□ 0.33
NUP54-205ENST00000507257 SYCE2Q6PIF2 218 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 TMPRSS11AQ6ZMR5 421 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 ZNF438Q7Z4V0 828 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 GALNT10Q86SR1 603 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 SLC5A8Q8N695 610 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 B3GNT7Q8NFL0 401 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 EXOC2Q96KP1 924 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 SLC22A4Q9H015 551 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 TMEM245Q9H330 911 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 PRDM8Q9NQV8 689 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 ACOXLQ9NUZ1 547 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 PAQR5Q9NXK6 330 aaPredicted RBP17.14■□□□□ 0.33
NUP54-205ENST00000507257 NDUFAF4Q9P032 175 aa17.14■□□□□ 0.33
NUP54-205ENST00000507257 CFAP20Q9Y6A4 193 aaKnown RBP17.14■□□□□ 0.33
NUP54-205ENST00000507257 ACSL4O60488 711 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 TRIM3O75382 744 aaPredicted RBP17.13■□□□□ 0.33
NUP54-205ENST00000507257 CLDN11O75508 207 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 ZNF865P0CJ78 1059 aaPredicted RBP17.13■□□□□ 0.33
NUP54-205ENST00000507257 IL7P13232 177 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 NUDT6P53370 316 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 SELENOWP63302 87 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 SCN1BQ07699 218 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 SSX1Q16384 188 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 TSTQ16762 297 aaKnown RBP17.13■□□□□ 0.33
NUP54-205ENST00000507257 UGT8Q16880 541 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 MICAQ29983 383 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 GPAT3Q53EU6 434 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 SIGIRRQ6IA17 410 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 NOXRED1Q6NXP6 359 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 XKRXQ6PP77 449 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 ZNF621Q6ZSS3 439 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 CACTIN-AS1Q8N1I8 211 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 JPH3Q8WXH2 748 aaPredicted RBP17.13■□□□□ 0.33
NUP54-205ENST00000507257 APIPQ96GX9 242 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 METTL2AQ96IZ6 378 aaKnown RBP17.13■□□□□ 0.33
NUP54-205ENST00000507257 TPD52L3Q96J77 140 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 MAPKAP1Q9BPZ7 522 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms