RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 INTS6Q9UL03 887 aaKnown RBP11.96□□□□□ -0.49
USP11-206ENST00000469080 WBP11Q9Y2W2 641 aaKnown RBP11.96□□□□□ -0.49
USP11-206ENST00000469080 TRPM7Q96QT4 1865 aa11.96□□□□□ -0.49
USP11-206ENST00000469080 TRAV20A0A0B4J274 112 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 GNG14A0A1W2PPG7 69 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 MROH6A6NGR9 719 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 SAGE2PA6NJ88 616 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 AP3D1O14617 1153 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 DIRAS1O95057 198 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 NPPAP01160 153 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 EN2P19622 333 aaPredicted RBP11.96□□□□□ -0.5
USP11-206ENST00000469080 HOXC13P31276 330 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 SOX9P48436 509 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 HK3P52790 923 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 PLA2G16P53816 162 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 CDC20Q12834 499 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 NAE1Q13564 534 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 ABRAXAS2Q15018 415 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 FAM174BQ3ZCQ3 159 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 GTDC1Q4AE62 458 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 ARHGAP15Q53QZ3 475 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 CTSL3PQ5NE16 218 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 SUSD1Q6UWL2 747 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 LYSMD2Q8IV50 215 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 MICU2Q8IYU8 434 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 ZNF683Q8IZ20 524 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 SMG7Q92540 1137 aaKnown RBP11.96□□□□□ -0.5
USP11-206ENST00000469080 SUV39H2Q9H5I1 410 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 GPN2Q9H9Y4 310 aaPredicted RBP11.96□□□□□ -0.5
USP11-206ENST00000469080 TDP1Q9NUW8 608 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 EXD2Q9NVH0 621 aa11.96□□□□□ -0.5
USP11-206ENST00000469080 DIMT1Q9UNQ2 313 aaKnown RBP11.96□□□□□ -0.5
USP11-206ENST00000469080 TFECO14948 347 aaPredicted RBP11.95□□□□□ -0.5
USP11-206ENST00000469080 NPHS1O60500 1241 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 SLC22A3O75751 556 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 SLITRK5O94991 958 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 ATP5BP06576 529 aaKnown RBP11.95□□□□□ -0.5
USP11-206ENST00000469080 ZNF250P15622 560 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 IL10P22301 178 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 FDXRP22570 491 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 ERVPABLB-1P60509 514 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 MPPE1Q53F39 396 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 RAET1GQ6H3X3 334 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 ZNF704Q6ZNC4 412 aaPredicted RBP11.95□□□□□ -0.5
USP11-206ENST00000469080 ZNF621Q6ZSS3 439 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 ZSWIM9Q86XI8 627 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 RBFAQ8N0V3 343 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 PGAM4Q8N0Y7 254 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 ZBTB44Q8NCP5 570 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 CD200R1Q8TD46 325 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 PIP5K1AQ99755 562 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 TUBB1Q9H4B7 451 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 DYRK4Q9NR20 520 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 RP1L1Q8IWN7 2480 aaPredicted RBP11.95□□□□□ -0.5
USP11-206ENST00000469080 TRIM38O00635 465 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 BCAS2O75934 225 aaPredicted RBP11.95□□□□□ -0.5
USP11-206ENST00000469080 MTHFD2P13995 350 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 CACNG1Q06432 222 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 PIGFQ07326 219 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 SCRN3Q0VDG4 424 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 NFATC2Q13469 925 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 RFTN2Q52LD8 501 aaPredicted RBP11.95□□□□□ -0.5
USP11-206ENST00000469080 PAGE3Q5JUK9 113 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 CFAP77Q6ZQR2 320 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 STK32CQ86UX6 486 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 MFSD4AQ8N468 514 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 FAM83FQ8NEG4 500 aaPredicted RBP11.95□□□□□ -0.5
USP11-206ENST00000469080 OR10A6Q8NH74 314 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 PMM1Q92871 262 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 FAM162AQ96A26 154 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 ELAC1Q9H777 363 aaKnown RBP11.95□□□□□ -0.5
USP11-206ENST00000469080 IL17CQ9P0M4 197 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 SPASTQ9UBP0 616 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 KCNE2Q9Y6J6 123 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 STON1Q9Y6Q2 735 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 IGLV3-10A0A075B6K4 115 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 PGLSO95336 258 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 PROS1P07225 676 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 SRCP12931 536 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 EPB42P16452 691 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 ELK4P28324 431 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 PRIM2P49643 509 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 ZNF140P52738 457 aaPredicted RBP11.95□□□□□ -0.5
USP11-206ENST00000469080 PPP5CP53041 499 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 SRP54P61011 504 aaKnown RBP11.95□□□□□ -0.5
USP11-206ENST00000469080 CD83Q01151 205 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 IRF8Q02556 426 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 LRRC74AQ0VAA2 488 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 BTN1A1Q13410 526 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 GRIN2CQ14957 1233 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 ZNF284Q2VY69 593 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 IER5LQ5T953 404 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 CFAP206Q8IYR0 622 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 SFRP1Q8N474 314 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 DHRSXQ8N5I4 330 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 TMEM175Q9BSA9 504 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 GON7Q9BXV9 100 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 SPATA6Q9NWH7 488 aaPredicted RBP11.95□□□□□ -0.5
USP11-206ENST00000469080 BAG5Q9UL15 447 aa11.95□□□□□ -0.5
USP11-206ENST00000469080 ZNF98A6NK75 572 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms