RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 XCR1P46094 333 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 AGTR2P50052 363 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 RELAQ04206 551 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 PRDX1Q06830 199 aaKnown RBP16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 GBX1Q14549 363 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 FASTKD1Q53R41 847 aaKnown RBP16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 CMPK2Q5EBM0 449 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 MFSD4BQ5TF39 518 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 ICE2Q659A1 982 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 PAPD4Q6PIY7 484 aaKnown RBP16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 LGI4Q8N135 537 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 KIF2BQ8N4N8 673 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 SLC5A8Q8N695 610 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 HORMAD2Q8N7B1 307 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 OR9A1PQ8NGU1 263 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 SKA2Q8WVK7 121 aaPredicted RBP16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 SMPDL3AQ92484 453 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 RERGQ96A58 199 aaPredicted RBP16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 ZNHIT6Q9NWK9 470 aaKnown RBP16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 HCN3Q9P1Z3 774 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 TAC3Q9UHF0 121 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 TSR3Q9UJK0 312 aaKnown RBP16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 PCDHA3Q9Y5H8 950 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 FN1P02751 2386 aaKnown RBP16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 ARHGEF33A8MVX0 844 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 TXNDC9O14530 226 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 KLK8O60259 260 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 NSA2O95478 260 aaKnown RBP16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 TPP2P29144 1249 aaPredicted RBP16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 RPA3P35244 121 aaPredicted RBP16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 RFC3P40938 356 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 AVPR1BP47901 424 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 RHAGQ02094 409 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 MYBPHQ13203 477 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 PTK6Q13882 451 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 USP10Q14694 798 aaKnown RBP16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 SFT2D3Q587I9 215 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 CTSL3PQ5NE16 218 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 TMEM211Q6ICI0 200 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 VN1R4Q7Z5H5 301 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 PCGF5Q86SE9 256 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 ELP5Q8TE02 316 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 RND1Q92730 232 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 SEC16BQ96JE7 1060 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 PLSCR2Q9NRY7 297 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 DNAJB12Q9NXW2 375 aaKnown RBP16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 L3MBTL1Q9Y468 752 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 MRFAP1Q9Y605 127 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 JMJD1CQ15652 2540 aa16.14■□□□□ 0.17
UBE2D4-209ENST00000454428 MYO1CO00159 1063 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 MFAP3LO75121 409 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 ZWINTO95229 277 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 PKMP14618 531 aaKnown RBP16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 FOSL1P15407 271 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 TFEBP19484 476 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 BCL6P41182 706 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 MEOX1P50221 254 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 DLX5P56178 289 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 TPM4P67936 248 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 ADAM8P78325 824 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 LTBQ06643 244 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 CDH17Q12864 832 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 PTRHD1Q6GMV3 140 aaKnown RBP16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 OTOAQ7RTW8 1153 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 PDSS2Q86YH6 399 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 PPFIBP2Q8ND30 876 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 GSDMBQ8TAX9 411 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 MAGEC3Q8TD91 643 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 TSLPQ969D9 159 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 CCDC138Q96M89 665 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 PANX3Q96QZ0 392 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 SMR3AQ99954 134 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 MACROD1Q9BQ69 325 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 LANCL2Q9NS86 450 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 CATSPERZQ9NTU4 200 aa16.13■□□□□ 0.17
UBE2D4-209ENST00000454428 SGK494L7N484 410 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 NDC80O14777 642 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 PSMD3O43242 534 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 PROM1O43490 865 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 HS6ST1O60243 411 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 IL1RNP18510 177 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 RPS3P23396 243 aaKnown RBP eCLIP16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 ADRA1DP25100 572 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 NUP107P57740 925 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 SLC26A5P58743 744 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 PMPCAQ10713 525 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 ABRAXAS2Q15018 415 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 NDUFA9Q16795 377 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 P3H1Q32P28 736 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 CAVIN1Q6NZI2 390 aaKnown RBP16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 LINC00523Q86TU6 105 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 RPS19BP1Q86WX3 136 aaKnown RBP16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 SULF2Q8IWU5 870 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 POGLUT1Q8NBL1 392 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 PLPP5Q8NEB5 264 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 C16orf52Q8NHV5 167 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 ALG3Q92685 438 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 FOPNLQ96NB1 174 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 BIRC8Q96P09 236 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 TP63Q9H3D4 680 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms