RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 SCGB2A2Q13296 93 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 DRAP1Q14919 205 aaPredicted RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 LARS2Q15031 903 aaKnown RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 PDCD1Q15116 288 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 TBCCQ15814 346 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 ZFP69Q49AA0 526 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 ELP2Q6IA86 826 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 ADNP2Q6IQ32 1131 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 DCUN1D2Q6PH85 259 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 UGT2A3Q6UWM9 527 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 CERS6Q6ZMG9 384 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 PLEKHG7Q6ZR37 379 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 ARPINQ7Z6K5 226 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 IGFN1Q86VF2 1251 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 AMZ2Q86W34 360 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 THOC6Q86W42 341 aaKnown RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 PLD3Q8IV08 490 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 CCDC71Q8IV32 467 aaPredicted RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 KATNAL2Q8IYT4 538 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 NECAB1Q8N987 351 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 OR5T2Q8NGG2 359 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 COPS5Q92905 334 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 MR1Q95460 341 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 COA7Q96BR5 231 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 NXPE2Q96DL1 559 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 APOLD1Q96LR9 279 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 PANX1Q96RD7 426 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 CDCA3Q99618 268 aaPredicted RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 HSD17B14Q9BPX1 270 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 ORAI3Q9BRQ5 295 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 TMEM175Q9BSA9 504 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 GPR87Q9BY21 358 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 DNTTIP1Q9H147 329 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 KLHL31Q9H511 634 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 ZNF556Q9HAH1 456 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 ACOXLQ9NUZ1 547 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 MED17Q9NVC6 651 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 DNAJC28Q9NX36 388 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 P4HTMQ9NXG6 502 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 TREM2Q9NZC2 230 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 INTS6Q9UL03 887 aaKnown RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 LIPT1Q9Y234 373 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 CA5BQ9Y2D0 317 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 KLK4Q9Y5K2 254 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 UBE4BO95155 1302 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 THSD7AQ9UPZ6 1657 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 PHRF1Q9P1Y6 1649 aaKnown RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 C9orf170A2RU37 121 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 FAM149AA5PLN7 773 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 LRRN3E7EW58 273 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 GPAA1O43292 621 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 TSPAN2O60636 221 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 PDE9AO76083 593 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 KAT7O95251 611 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 PCCBP05166 539 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 C1SP09871 688 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 UQCRBP14927 111 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 EFNA1P20827 205 aaPredicted RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 PSMB6P28072 239 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 EPHX2P34913 555 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 MC3RP41968 323 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 SLC1A2P43004 574 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 SOX4Q06945 474 aaPredicted RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 OVGP1Q12889 678 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 SLC9A3R2Q15599 337 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 TRAM1Q15629 374 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 SLC1A5Q15758 541 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 PDK4Q16654 411 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 GAB4Q2WGN9 574 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 UGT3A2Q3SY77 523 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 CHRFAM7AQ494W8 412 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 ZNF569Q5MCW4 686 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 KHDRBS2Q5VWX1 349 aaKnown RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 PRR5LQ6MZQ0 368 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 AFTPHQ6ULP2 937 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 MAMDC4Q6UXC1 1216 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 ZBTB49Q6ZSB9 765 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 C1orf186Q6ZWK4 172 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 ZNF767PQ75MW2 155 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 POLNQ7Z5Q5 900 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 TFAP2DQ7Z6R9 452 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 LINC00528Q8N1L1 170 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 STK40Q8N2I9 435 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 PAPD5Q8NDF8 572 aaKnown RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 ADPRHL1Q8NDY3 354 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 OR4C15Q8NGM1 316 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 C9orf43Q8TAL5 461 aaPredicted RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 STT3BQ8TCJ2 826 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 NEK7Q8TDX7 302 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 STYXQ8WUJ0 223 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 CKAP2Q8WWK9 683 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 CASKIN2Q8WXE0 1202 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 APBB2Q92870 758 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 GAL3ST3Q96A11 431 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 RRNAD1Q96FB5 475 aaKnown RBP4.82□□□□□ -1.64
EPHA3-202ENST00000452448 NUDT11Q96G61 164 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 ZFP42Q96MM3 310 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 SEMA3CQ99985 751 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 MGME1Q9BQP7 344 aa4.82□□□□□ -1.64
EPHA3-202ENST00000452448 HINT2Q9BX68 163 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms