RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 TIAL1Q01085 375 aaKnown RBP eCLIP19.92■□□□□ 0.78
VSX1-206ENST00000444511 DHX9Q08211 1270 aaKnown RBP19.92■□□□□ 0.78
VSX1-206ENST00000444511 MINDY4Q4G0A6 757 aa19.92■□□□□ 0.78
VSX1-206ENST00000444511 PAQR3Q6TCH7 311 aa19.92■□□□□ 0.78
VSX1-206ENST00000444511 MBOAT1Q6ZNC8 495 aa19.92■□□□□ 0.78
VSX1-206ENST00000444511 CAMKVQ8NCB2 501 aa19.92■□□□□ 0.78
VSX1-206ENST00000444511 HAS2Q92819 552 aa19.92■□□□□ 0.78
VSX1-206ENST00000444511 MACROD1Q9BQ69 325 aa19.92■□□□□ 0.78
VSX1-206ENST00000444511 NAT9Q9BTE0 207 aa19.92■□□□□ 0.78
VSX1-206ENST00000444511 TUBB6Q9BUF5 446 aa19.92■□□□□ 0.78
VSX1-206ENST00000444511 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.92■□□□□ 0.78
VSX1-206ENST00000444511 ATG10Q9H0Y0 220 aa19.92■□□□□ 0.78
VSX1-206ENST00000444511 SNX12Q9UMY4 172 aa19.92■□□□□ 0.78
VSX1-206ENST00000444511 PABPN1LA6NDY0 278 aaKnown RBP19.91■□□□□ 0.78
VSX1-206ENST00000444511 CES2O00748 559 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 DNALI1O14645 258 aaPredicted RBP19.91■□□□□ 0.78
VSX1-206ENST00000444511 SLC16A5O15375 505 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 LRRTM2O43300 516 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 BANF1O75531 89 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 JRKO75564 520 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 HIST1H2AGP0C0S8 130 aaPredicted RBP19.91■□□□□ 0.78
VSX1-206ENST00000444511 ITGAMP11215 1152 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 IL1RNP18510 177 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 HIST1H2ADP20671 130 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 GRK3P35626 688 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 PER3P56645 1201 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 NAE1Q13564 534 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 RBM20Q5T481 1227 aaKnown RBP19.91■□□□□ 0.78
VSX1-206ENST00000444511 KIAA0408Q6ZU52 694 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 PRSS41Q7RTY9 318 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 PCGF5Q86SE9 256 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 LINGO1Q96FE5 620 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 HIST1H2AHQ96KK5 128 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 HIST1H2AJQ99878 128 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 SLX1AQ9BQ83 275 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 H2AFJQ9BTM1 129 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 VN1R1Q9GZP7 353 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 DDX47Q9H0S4 455 aaKnown RBP19.91■□□□□ 0.78
VSX1-206ENST00000444511 HCN3Q9P1Z3 774 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 SH2B3Q9UQQ2 575 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 DOPEY1Q5JWR5 2465 aa19.91■□□□□ 0.78
VSX1-206ENST00000444511 UNC79Q9P2D8 2635 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 FEZF1A0PJY2 475 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 ZSCAN12O43309 604 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 F10P00742 488 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 AHSGP02765 367 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 GABRB3P28472 473 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 XCR1P46094 333 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 EFNA3P52797 238 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 CDKN2DP55273 166 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 INAQ16352 499 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 BBS9Q3SYG4 887 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 ABHD17BQ5VST6 288 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 ZNF787Q6DD87 383 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 TMEM214Q6NUQ4 689 aaKnown RBP19.9■□□□□ 0.78
VSX1-206ENST00000444511 ASPGQ86U10 573 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 OR51Q1Q8NH59 317 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 ZCCHC10Q8TBK6 192 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 CERS2Q96G23 380 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 IMMP1LQ96LU5 166 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 CYTH2Q99418 400 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 FAM129AQ9BZQ8 928 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 ANKHQ9HCJ1 492 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 PPANQ9NQ55 473 aaKnown RBP19.9■□□□□ 0.78
VSX1-206ENST00000444511 C19orf25Q9UFG5 118 aaPredicted RBP19.9■□□□□ 0.78
VSX1-206ENST00000444511 TEKT2Q9UIF3 430 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 HEATR5BQ9P2D3 2071 aa19.9■□□□□ 0.78
VSX1-206ENST00000444511 SGK494L7N484 410 aa19.89■□□□□ 0.77
VSX1-206ENST00000444511 SEC24DO94855 1032 aaPredicted RBP19.89■□□□□ 0.77
VSX1-206ENST00000444511 WDPCPO95876 746 aa19.89■□□□□ 0.77
VSX1-206ENST00000444511 CYC1P08574 325 aa19.89■□□□□ 0.77
VSX1-206ENST00000444511 SLC35G6P0C7Q6 338 aa19.89■□□□□ 0.77
VSX1-206ENST00000444511 CDH1P12830 882 aa19.89■□□□□ 0.77
VSX1-206ENST00000444511 BCL6P41182 706 aa19.89■□□□□ 0.77
VSX1-206ENST00000444511 IL2P60568 153 aa19.89■□□□□ 0.77
VSX1-206ENST00000444511 PDAP1Q13442 181 aaKnown RBP19.89■□□□□ 0.77
VSX1-206ENST00000444511 PHKG1Q16816 387 aa19.89■□□□□ 0.77
VSX1-206ENST00000444511 MSS51Q4VC12 460 aa19.89■□□□□ 0.77
VSX1-206ENST00000444511 CAPN13Q6MZZ7 669 aaPredicted RBP19.89■□□□□ 0.77
VSX1-206ENST00000444511 HIBCHQ6NVY1 386 aaPredicted RBP19.89■□□□□ 0.77
VSX1-206ENST00000444511 LCTLQ6UWM7 567 aa19.89■□□□□ 0.77
VSX1-206ENST00000444511 LANCL3Q6ZV70 420 aa19.89■□□□□ 0.77
VSX1-206ENST00000444511 CPEB2Q7Z5Q1 589 aaKnown RBP19.89■□□□□ 0.77
VSX1-206ENST00000444511 CNTN4Q8IWV2 1026 aa19.89■□□□□ 0.77
VSX1-206ENST00000444511 SUN3Q8TAQ9 357 aa19.89■□□□□ 0.77
VSX1-206ENST00000444511 SLC13A3Q8WWT9 602 aa19.89■□□□□ 0.77
VSX1-206ENST00000444511 HAUS8Q9BT25 410 aa19.89■□□□□ 0.77
VSX1-206ENST00000444511 SGPP1Q9BX95 441 aa19.89■□□□□ 0.77
VSX1-206ENST00000444511 IGHV3-20A0A0C4DH32 117 aa19.88■□□□□ 0.77
VSX1-206ENST00000444511 DCTP40126 519 aa19.88■□□□□ 0.77
VSX1-206ENST00000444511 ZNF33BQ06732 778 aa19.88■□□□□ 0.77
VSX1-206ENST00000444511 SLC26A11Q86WA9 606 aa19.88■□□□□ 0.77
VSX1-206ENST00000444511 GPATCH11Q8N954 259 aa19.88■□□□□ 0.77
VSX1-206ENST00000444511 KCT2Q8NC54 265 aa19.88■□□□□ 0.77
VSX1-206ENST00000444511 SLCO2A1Q92959 643 aa19.88■□□□□ 0.77
VSX1-206ENST00000444511 TM4SF19Q96DZ7 209 aa19.88■□□□□ 0.77
VSX1-206ENST00000444511 TRIM54Q9BYV2 358 aa19.88■□□□□ 0.77
VSX1-206ENST00000444511 RNF32Q9H0A6 362 aa19.88■□□□□ 0.77
VSX1-206ENST00000444511 ARL15Q9NXU5 204 aa19.88■□□□□ 0.77
VSX1-206ENST00000444511 MDC1Q14676 2089 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 917.4 ms