RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 NATD1Q8N6N6 113 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 FAM46DQ8NEK8 389 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 ABHD11Q8NFV4 315 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 PAK6Q9NQU5 681 aaPredicted RBP16.88■□□□□ 0.29
PTPRU-202ENST00000373779 PRAMEF33A0A0G2JMD5 474 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 ABHD14A-ACY1A0A1B0GW23 586 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 GSAPA4D1B5 854 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 COCHO43405 550 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 PRAMEF10O60809 474 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 GKP32189 559 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 VIPR1P32241 457 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 KCNC3Q14003 757 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 ZCCHC3Q9NUD5 404 aaKnown RBP16.88■□□□□ 0.29
PTPRU-202ENST00000373779 DEC1Q9P2X7 70 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 STOML2Q9UJZ1 356 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 ITIH1P19827 911 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 PSMD8P48556 350 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 CD47Q08722 323 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 RAPSNQ13702 412 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 IDNKQ5T6J7 187 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 PLPP4Q5VZY2 271 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 FAM171BQ6P995 826 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 CEACAM20Q6UY09 585 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 ZNF367Q7RTV3 350 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 TMEM80Q96HE8 168 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 TMEM27Q9HBJ8 222 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 GJB5O95377 273 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 OR1E2P47887 323 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 SUZ12Q15022 739 aaKnown RBP16.87■□□□□ 0.29
PTPRU-202ENST00000373779 NUDT13Q86X67 352 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 MEIOBQ8N635 442 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 FBXO10Q9UK96 956 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 VILLO15195 856 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 CDRT1O95170 752 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 YES1P07947 543 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 RPS17P08708 135 aaKnown RBP16.87■□□□□ 0.29
PTPRU-202ENST00000373779 CLDN8P56748 225 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 NPRL3Q12980 569 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 EIF2B5Q13144 721 aaKnown RBP16.87■□□□□ 0.29
PTPRU-202ENST00000373779 ARSIQ5FYB1 569 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 PRAMEF14Q5SWL7 426 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 PRAMEF13Q5VWM6 474 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 ZNF783Q6ZMS7 281 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 FAM110BQ8TC76 370 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 GAB3Q8WWW8 586 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 OVCA2Q8WZ82 227 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 CACNB4O00305 520 aaPredicted RBP16.87■□□□□ 0.29
PTPRU-202ENST00000373779 HNF1BP35680 557 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 NCBP2P52298 156 aaKnown RBP eCLIP16.87■□□□□ 0.29
PTPRU-202ENST00000373779 PLEKHS1Q5SXH7 462 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 C6orf183Q5T699 404 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 LETMD1Q6P1Q0 360 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 LRRTM3Q86VH5 581 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 ZMIZ2Q8NF64 920 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 ZNF514Q96K75 400 aaPredicted RBP16.87■□□□□ 0.29
PTPRU-202ENST00000373779 DOHHQ9BU89 302 aa16.87■□□□□ 0.29
PTPRU-202ENST00000373779 SOCS5O75159 536 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 ZNF30P17039 623 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 TAS2R50P59544 299 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 LIPJQ5W064 366 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 SHQ1Q6PI26 577 aaKnown RBP16.86■□□□□ 0.29
PTPRU-202ENST00000373779 Q6ZVU0 165 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 SERINC5Q86VE9 423 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 RNF130Q86XS8 419 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 KLHL36Q8N4N3 616 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 DNASE1L2Q92874 299 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 CAMK1GQ96NX5 476 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 MYOCQ99972 504 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 GPR45Q9Y5Y3 372 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 SLITRK5O94991 958 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 SOX14O95416 240 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 VIPP01282 170 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 GBAP04062 536 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 IFNA16P05015 189 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 SCD5Q86SK9 330 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 RANBP3LQ86VV4 465 aaPredicted RBP16.86■□□□□ 0.29
PTPRU-202ENST00000373779 OR10G6Q8NH81 332 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 SH3RF2Q8TEC5 729 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 HERC2P3Q9BVR0 1158 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 BRINP2Q9C0B6 783 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 CCRL2O00421 344 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 ALPPP05187 535 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 GSTM3P21266 225 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 IDSP22304 550 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 GUCA1AP43080 201 aaPredicted RBP16.86■□□□□ 0.29
PTPRU-202ENST00000373779 OMPP47874 163 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 CHPFQ8IZ52 775 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 CMAHPQ9Y471 501 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 ALDOCP09972 364 aaKnown RBP16.86■□□□□ 0.29
PTPRU-202ENST00000373779 WSCD2Q2TBF2 565 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 C22orf39Q6P5X5 142 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 FRS2Q8WU20 508 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 ISL2Q96A47 359 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 TRNT1Q96Q11 434 aaKnown RBP16.86■□□□□ 0.29
PTPRU-202ENST00000373779 GINS4Q9BRT9 223 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 TTLL2Q9BWV7 592 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 RHCGQ9UBD6 479 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 SPO11Q9Y5K1 396 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 GRXCR2A6NFK2 248 aa16.86■□□□□ 0.29
PTPRU-202ENST00000373779 PPP6CO00743 305 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms