RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 GBF1Q92538 1859 aa16.35■□□□□ 0.21
DKC1-201ENST00000369550 MBLAC1A4D2B0 266 aaPredicted RBP16.34■□□□□ 0.21
DKC1-201ENST00000369550 TNFRSF10BO14763 440 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 SUV39H1O43463 412 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 SNAI1O95863 264 aaPredicted RBP16.34■□□□□ 0.21
DKC1-201ENST00000369550 MYCP01106 439 aaPredicted RBP16.34■□□□□ 0.21
DKC1-201ENST00000369550 EPB42P16452 691 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 HOXB9P17482 250 aaPredicted RBP16.34■□□□□ 0.21
DKC1-201ENST00000369550 PKLRP30613 574 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 KIR3DL1P43629 444 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 RORCP51449 518 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 ARPP19P56211 112 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 FAPQ12884 760 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 DUSP28Q4G0W2 176 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 ATCAYQ86WG3 371 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 DENND6BQ8NEG7 585 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 C9orf43Q8TAL5 461 aaPredicted RBP16.34■□□□□ 0.21
DKC1-201ENST00000369550 SPPL2AQ8TCT8 520 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 MAP6Q96JE9 813 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 SRRQ9GZT4 340 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 ZNF226Q9NYT6 803 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 ARL5CA6NH57 179 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 EBLN1P0CF75 366 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 MLLT3P42568 568 aaPredicted RBP16.34■□□□□ 0.21
DKC1-201ENST00000369550 UPP1Q16831 310 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 DPY19L3Q6ZPD9 716 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 HOMEZQ8IX15 550 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 VWA5B2Q8N398 1253 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 OR10G2Q8NGC3 310 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 ZFAND1Q8TCF1 268 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 CINPQ9BW66 212 aaPredicted RBP16.34■□□□□ 0.21
DKC1-201ENST00000369550 BARHL1Q9BZE3 327 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 CIPCQ9C0C6 399 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 TMEM184CQ9NVA4 438 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 GABRQQ9UN88 632 aa16.34■□□□□ 0.21
DKC1-201ENST00000369550 NUP214P35658 2090 aaPredicted RBP16.34■□□□□ 0.21
DKC1-201ENST00000369550 E9PQ18 207 aa16.33■□□□□ 0.21
DKC1-201ENST00000369550 NBNO60934 754 aa16.33■□□□□ 0.21
DKC1-201ENST00000369550 TBX18O95935 607 aa16.33■□□□□ 0.21
DKC1-201ENST00000369550 GLUD1P00367 558 aa16.33■□□□□ 0.21
DKC1-201ENST00000369550 CRYBB1P53674 252 aaPredicted RBP16.33■□□□□ 0.21
DKC1-201ENST00000369550 FOXD4Q12950 439 aaPredicted RBP16.33■□□□□ 0.21
DKC1-201ENST00000369550 PPIGQ13427 754 aaKnown RBP eCLIP16.33■□□□□ 0.212e-6■■□□□ 12.1
DKC1-201ENST00000369550 PTPRRQ15256 657 aa16.33■□□□□ 0.21
DKC1-201ENST00000369550 TOR1AIP1Q5JTV8 583 aa16.33■□□□□ 0.21
DKC1-201ENST00000369550 PDZK1Q5T2W1 519 aa16.33■□□□□ 0.21
DKC1-201ENST00000369550 FAM124AQ86V42 546 aa16.33■□□□□ 0.21
DKC1-201ENST00000369550 FAM217AQ8IXS0 508 aa16.33■□□□□ 0.21
DKC1-201ENST00000369550 CAMKK1Q8N5S9 505 aa16.33■□□□□ 0.21
DKC1-201ENST00000369550 NATD1Q8N6N6 113 aa16.33■□□□□ 0.21
DKC1-201ENST00000369550 SELENOMQ8WWX9 145 aa16.33■□□□□ 0.21
DKC1-201ENST00000369550 RNF121Q9H920 327 aa16.33■□□□□ 0.21
DKC1-201ENST00000369550 RLIMQ9NVW2 624 aa16.33■□□□□ 0.21
DKC1-201ENST00000369550 TRPS1Q9UHF7 1281 aa16.33■□□□□ 0.21
DKC1-201ENST00000369550 IGLV3-10A0A075B6K4 115 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 A0A0D9SEW6 157 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 B4DXG7 233 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 MEN1O00255 615 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 SCAMP3O14828 347 aaKnown RBP16.33■□□□□ 0.2
DKC1-201ENST00000369550 NOS1APO75052 506 aaPredicted RBP16.33■□□□□ 0.2
DKC1-201ENST00000369550 CPSF4O95639 269 aaKnown RBP16.33■□□□□ 0.2
DKC1-201ENST00000369550 PDYNP01213 254 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 SLC10A3P09131 477 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 CCNYL3P0C7X3 344 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 PRPS2P11908 318 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 RGRP47804 291 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 RGS4P49798 205 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.33■□□□□ 0.2
DKC1-201ENST00000369550 ARHGEF7Q14155 803 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 EFR3AQ14156 821 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 SSX1Q16384 188 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 PAMR1Q6UXH9 720 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 GPR142Q7Z601 462 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 PTOV1Q86YD1 416 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 PGBD3Q8N328 593 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 YIPF7Q8N8F6 280 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 ENKURQ8TC29 256 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 DEDD2Q8WXF8 326 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 C7orf34Q96L11 122 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 NECTIN4Q96NY8 510 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 SPON2Q9BUD6 331 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 C11orf54Q9H0W9 315 aaPredicted RBP16.33■□□□□ 0.2
DKC1-201ENST00000369550 TLR8Q9NR97 1041 aaKnown RBP16.33■□□□□ 0.2
DKC1-201ENST00000369550 PCDHGC4Q9Y5F7 938 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 CFAP20Q9Y6A4 193 aaKnown RBP16.33■□□□□ 0.2
DKC1-201ENST00000369550 COL4A4P53420 1690 aaPredicted RBP16.33■□□□□ 0.2
DKC1-201ENST00000369550 MAGEB17A8MXT2 336 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 SDC1P18827 310 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 TGM4P49221 684 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 YBEYP58557 167 aaPredicted RBP16.33■□□□□ 0.2
DKC1-201ENST00000369550 ASAH1Q13510 395 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 GRB14Q14449 540 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 DUOXA1Q1HG43 343 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 FAM20CQ8IXL6 584 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 FAM9CQ8IZT9 166 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 THEM5Q8N1Q8 247 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 USP7Q93009 1102 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 TESCQ96BS2 214 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 NIPSNAP1Q9BPW8 284 aa16.33■□□□□ 0.2
DKC1-201ENST00000369550 UCK2Q9BZX2 261 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms