RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 DEFB109BQ30KR1 87 aa17.64■□□□□ 0.41
CHTOP-202ENST00000368687 LRRC70Q7Z2Q7 622 aa17.64■□□□□ 0.41
CHTOP-202ENST00000368687 ASPGQ86U10 573 aa17.64■□□□□ 0.41
CHTOP-202ENST00000368687 APLFQ8IW19 511 aaPredicted RBP17.64■□□□□ 0.41
CHTOP-202ENST00000368687 SPATA6LQ8N4H0 392 aa17.64■□□□□ 0.41
CHTOP-202ENST00000368687 MFSD9Q8NBP5 474 aa17.64■□□□□ 0.41
CHTOP-202ENST00000368687 TTLQ8NG68 377 aa17.64■□□□□ 0.41
CHTOP-202ENST00000368687 C10orf90Q96M02 699 aa17.64■□□□□ 0.41
CHTOP-202ENST00000368687 TSNARE1Q96NA8 513 aa17.64■□□□□ 0.41
CHTOP-202ENST00000368687 ALG9Q9H6U8 611 aa17.64■□□□□ 0.41
CHTOP-202ENST00000368687 IGSF5Q9NSI5 407 aa17.64■□□□□ 0.41
CHTOP-202ENST00000368687 ZNF282Q9UDV7 671 aaPredicted RBP17.64■□□□□ 0.41
CHTOP-202ENST00000368687 COL6A6A6NMZ7 2263 aa17.64■□□□□ 0.41
CHTOP-202ENST00000368687 SPTA1P02549 2419 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 URADA6NGE7 173 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 NCF1BA6NI72 391 aaPredicted RBP17.63■□□□□ 0.41
CHTOP-202ENST00000368687 NCF1CA8MVU1 366 aaPredicted RBP17.63■□□□□ 0.41
CHTOP-202ENST00000368687 POC1B-GALNT4F8VUJ3 575 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 PCDH17O14917 1159 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 H2AFYO75367 372 aaKnown RBP17.63■□□□□ 0.41
CHTOP-202ENST00000368687 STK16O75716 305 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 KLF7O75840 302 aaPredicted RBP17.63■□□□□ 0.41
CHTOP-202ENST00000368687 SNRPAP09012 282 aaKnown RBP17.63■□□□□ 0.41
CHTOP-202ENST00000368687 NCF1P14598 390 aaPredicted RBP17.63■□□□□ 0.41
CHTOP-202ENST00000368687 FBLP22087 321 aaKnown RBP17.63■□□□□ 0.41
CHTOP-202ENST00000368687 HPDP32754 393 aaPredicted RBP17.63■□□□□ 0.41
CHTOP-202ENST00000368687 MAGEA12P43365 314 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 AVPR1BP47901 424 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 RRADP55042 308 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 POLE2P56282 527 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 DSG2Q14126 1118 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 HKDC1Q2TB90 917 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 METTL2BQ6P1Q9 378 aaKnown RBP17.63■□□□□ 0.41
CHTOP-202ENST00000368687 NXPE4Q6UWF7 544 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 TMPRSS11BQ86T26 416 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 LCA5Q86VQ0 697 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 CENPLQ8N0S6 344 aaPredicted RBP17.63■□□□□ 0.41
CHTOP-202ENST00000368687 TRPV3Q8NET8 790 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 ADAMTS17Q8TE56 1095 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 UBTD2Q8WUN7 234 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 DCAKDQ8WVC6 231 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 SLC13A3Q8WWT9 602 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 COL26A1Q96A83 441 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 RUFY1Q96T51 708 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 TXLNGYQ9BZA5 131 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 DNAJC11Q9NVH1 559 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 C14orf105Q9NVL8 296 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 GEMIN8Q9NWZ8 242 aaKnown RBP17.63■□□□□ 0.41
CHTOP-202ENST00000368687 PTBP2Q9UKA9 531 aaKnown RBP17.63■□□□□ 0.41
CHTOP-202ENST00000368687 TMCO1Q9UM00 188 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 SH2B3Q9UQQ2 575 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 PTRH2Q9Y3E5 179 aaKnown RBP17.63■□□□□ 0.41
CHTOP-202ENST00000368687 KCNMB2Q9Y691 235 aa17.63■□□□□ 0.41
CHTOP-202ENST00000368687 BAHCC1Q9P281 2608 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 SUPT3HB4E1H0 165 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 H0YIG0 161 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 CLGNO14967 610 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 OR1F1O43749 312 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 SUPT3HO75486 399 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 BCL6P41182 706 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 REEP5Q00765 189 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 RGS1Q08116 209 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 IL10RAQ13651 578 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 PDK4Q16654 411 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 LINC00303Q3SY05 128 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 ATG9BQ674R7 924 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 MED25Q71SY5 747 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 VN1R4Q7Z5H5 301 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 PLD3Q8IV08 490 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 KRT78Q8N1N4 520 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 ARHGEF39Q8N4T4 335 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 TMEM102Q8N9M5 508 aaPredicted RBP17.62■□□□□ 0.41
CHTOP-202ENST00000368687 LRRN4CLQ8ND94 238 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 KCTD4Q8WVF5 259 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 NXNL1Q96CM4 212 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 TM4SF19Q96DZ7 209 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 ATOH8Q96SQ7 321 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 UNKQ9C0B0 810 aaKnown RBP17.62■□□□□ 0.41
CHTOP-202ENST00000368687 SEMA4CQ9C0C4 833 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 VPS11Q9H270 941 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 ZFP69BQ9UJL9 534 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 G3BP2Q9UN86 482 aaKnown RBP17.62■□□□□ 0.41
CHTOP-202ENST00000368687 SLC22A7Q9Y694 548 aa17.62■□□□□ 0.41
CHTOP-202ENST00000368687 TLN1Q9Y490 2541 aaKnown RBP17.61■□□□□ 0.41
CHTOP-202ENST00000368687 CCDC88CQ9P219 2028 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 IGLV3-12A0A075B6K2 115 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 IQANK1A0A1B0GTG1 560 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 PEX12O00623 359 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 RFPL1O75677 317 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 SLU7O95391 586 aaKnown RBP17.61■□□□□ 0.41
CHTOP-202ENST00000368687 NSA2O95478 260 aaKnown RBP17.61■□□□□ 0.41
CHTOP-202ENST00000368687 CYC1P08574 325 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 RBP1P09455 135 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 DLG1Q12959 904 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 KCNAB2Q13303 367 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 HERC3Q15034 1050 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 PAGE2BQ5JRK9 111 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 CATSPEREQ5SY80 951 aa17.61■□□□□ 0.41
CHTOP-202ENST00000368687 UBAP2Q5T6F2 1119 aaKnown RBP17.61■□□□□ 0.41
CHTOP-202ENST00000368687 TMEM214Q6NUQ4 689 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms