RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 SPASTQ9UBP0 616 aa14.14□□□□□ -0.15
CXCL12-201ENST00000343575 ZNF490Q9ULM2 529 aaPredicted RBP14.14□□□□□ -0.15
CXCL12-201ENST00000343575 OR5K4A6NMS3 321 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 B4DGG1 531 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 LMO7DNF2Z398 122 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 H0YJX3 145 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 PDYNP01213 254 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 ALDOCP09972 364 aaKnown RBP14.13□□□□□ -0.15
CXCL12-201ENST00000343575 HMOX2P30519 316 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 CNR2P34972 360 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 NR1H2P55055 460 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 TBL3Q12788 808 aaKnown RBP14.13□□□□□ -0.15
CXCL12-201ENST00000343575 ATG9BQ674R7 924 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 GRHL2Q6ISB3 625 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 NXPE4Q6UWF7 544 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 C16orf89Q6UX73 402 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 RNF111Q6ZNA4 994 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 TRIM46Q7Z4K8 759 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 AMIGO1Q86WK6 493 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 SYT12Q8IV01 421 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 FAM20CQ8IXL6 584 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 ZNF740Q8NDX6 193 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 FLVCR1-AS1Q8TAF5 88 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 LCN9Q8WX39 176 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 MTFMTQ96DP5 389 aaKnown RBP14.13□□□□□ -0.15
CXCL12-201ENST00000343575 MARK4Q96L34 752 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 HAUS8Q9BT25 410 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 RAB11FIP5Q9BXF6 653 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 EHD1Q9H4M9 534 aa14.13□□□□□ -0.15
CXCL12-201ENST00000343575 DNAAF2Q9NVR5 837 aaKnown RBP14.13□□□□□ -0.15
CXCL12-201ENST00000343575 CNOT11Q9UKZ1 510 aaKnown RBP14.13□□□□□ -0.15
CXCL12-201ENST00000343575 H0YIV9 168 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 H3BNX3 289 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 PPM1DO15297 605 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 PFDN1O60925 122 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 ULK1O75385 1050 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 VIPP01282 170 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 C1GALT1C1LP0DN25 315 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 CDH1P12830 882 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 ETS2P15036 469 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 GNSP15586 552 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 ITGAXP20702 1163 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 MAZP56270 477 aaKnown RBP14.12□□□□□ -0.15
CXCL12-201ENST00000343575 MEF2AQ02078 507 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-201ENST00000343575 DCTN2Q13561 401 aaKnown RBP14.12□□□□□ -0.15
CXCL12-201ENST00000343575 TEAD4Q15561 434 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 ZNF423Q2M1K9 1284 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 DEFB133Q30KQ1 61 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 SGO1Q5FBB7 561 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 FRG2Q64ET8 278 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 NXNQ6DKJ4 435 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 OGFOD3Q6PK18 319 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 RBM44Q6ZP01 1051 aaKnown RBP14.12□□□□□ -0.15
CXCL12-201ENST00000343575 GKN2Q86XP6 184 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 DEFB107AQ8IZN7 70 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 ABHD11Q8NFV4 315 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 ZFPM2Q8WW38 1151 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 NMD3Q96D46 503 aaKnown RBP14.12□□□□□ -0.15
CXCL12-201ENST00000343575 LRGUKQ96M69 825 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 FRG2BQ96QU4 278 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 OR6C2Q9NZP2 312 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 ZNF318Q5VUA4 2279 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 ZNF839A8K0R7 811 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 PATE3B3GLJ2 98 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 LSM1O15116 133 aaKnown RBP14.12□□□□□ -0.15
CXCL12-201ENST00000343575 NRP2O60462 931 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 CHEK2O96017 543 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 TFAP2AP05549 437 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 CHRM5P08912 532 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-201ENST00000343575 THRAP10827 490 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 NCF2P19878 526 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-201ENST00000343575 ADSLP30566 484 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-201ENST00000343575 SHMT2P34897 504 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 HNF4AP41235 474 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 RXRGP48443 463 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 PRDX1Q06830 199 aaKnown RBP14.12□□□□□ -0.15
CXCL12-201ENST00000343575 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-201ENST00000343575 CEP68Q76N32 757 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 EFL1Q7Z2Z2 1120 aaKnown RBP14.12□□□□□ -0.15
CXCL12-201ENST00000343575 ZNF761Q86XN6 746 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-201ENST00000343575 CROCCP3Q8IVE0 287 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 OR7G3Q8NG95 312 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 SH3KBP1Q96B97 665 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 TUBGCP3Q96CW5 907 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 ELF4Q99607 663 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-201ENST00000343575 ACPTQ9BZG2 426 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 RBM38Q9H0Z9 239 aaKnown RBP14.12□□□□□ -0.15
CXCL12-201ENST00000343575 OCEL1Q9H607 264 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 G3BP2Q9UN86 482 aaKnown RBP14.12□□□□□ -0.15
CXCL12-201ENST00000343575 DYRK1BQ9Y463 629 aa14.12□□□□□ -0.15
CXCL12-201ENST00000343575 DNAJA2O60884 412 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 CAPNS1P04632 268 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 COX4I1P13073 169 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 RAB15P59190 212 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 HMGCS1Q01581 520 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 HHEXQ03014 270 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 SIM2Q14190 667 aaPredicted RBP14.11□□□□□ -0.15
CXCL12-201ENST00000343575 SLBPQ14493 270 aaKnown RBP eCLIP14.11□□□□□ -0.15
CXCL12-201ENST00000343575 TLR1Q15399 786 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 LRRC36Q1X8D7 754 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms