RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CD2P06729 351 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 IQCF3P0C7M6 154 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 ALAS2P22557 587 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 STARP49675 285 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 COLEC12Q5KU26 742 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 REEP3Q6NUK4 255 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 TMEM40Q8WWA1 233 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 ALPK1Q96QP1 1244 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 C1QTNF1Q9BXJ1 281 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 MKKSQ9NPJ1 570 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 RIMKLBQ9ULI2 386 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 ZNF840PA6NDX5 716 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 EDIL3O43854 480 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 DFNA5O60443 496 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 HPRP00739 348 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 GIMD1P0DJR0 217 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 CDKN2DP55273 166 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 SNAP47Q5SQN1 464 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 OGFRL1Q5TC84 451 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 SLC30A6Q6NXT4 461 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 POMZP3Q6PJE2 187 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 EFHD2Q96C19 240 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 LRIG1Q96JA1 1093 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 PAAF1Q9BRP4 392 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 CNOT11Q9UKZ1 510 aaKnown RBP16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 LEFTY2O00292 366 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 RASAL1O95294 804 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 BCKDHAP12694 445 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 HSD17B1P14061 328 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 TMEM115Q12893 351 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 ZNF404Q494X3 552 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 KLHL24Q6TFL4 600 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 ISCA2Q86U28 154 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 ARFGAP1Q8N6T3 406 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 AQP11Q8NBQ7 271 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 TMEM145Q8NBT3 493 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 OR10Q1Q8NGQ4 319 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 METTL21AQ8WXB1 218 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 REEP4Q9H6H4 257 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 POLE3Q9NRF9 147 aa16.57■□□□□ 0.24
TRAPPC11-201ENST00000334690 RGPD5Q99666 1765 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 NAV1Q8NEY1 1877 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 MBLAC1A4D2B0 266 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 G3V2L1 256 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 DENRO43583 198 aaKnown RBP16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 JUNP05412 331 aaKnown RBP16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 RBBP4Q09028 425 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 ST3GAL3Q11203 375 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 TLR1Q15399 786 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 VMACQ2NL98 169 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 PIGGQ5H8A4 983 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 TPRG1LQ5T0D9 272 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 SLC25A24Q6NUK1 477 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 XKR5Q6UX68 686 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 IQCHQ86VS3 1027 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 ATCAYQ86WG3 371 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 CLIP4Q8N3C7 705 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 CAMKVQ8NCB2 501 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 BPIFB1Q8TDL5 484 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 TSEN15Q8WW01 171 aaKnown RBP16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 L3HYPDHQ96EM0 354 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 TRMT61BQ9BVS5 477 aaKnown RBP16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 LATS1O95835 1130 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 RFC2P35250 354 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 HNF1BP35680 557 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 SPRED3Q2MJR0 410 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 OR56A1Q8NGH5 318 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 DSN1Q9H410 356 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 EHD1Q9H4M9 534 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 UTS2RQ9UKP6 389 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 KMOO15229 486 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 KRT33AO76009 404 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 SNAP29O95721 258 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 T-ENOLP0DO92 83 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 PAMR1Q6UXH9 720 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 NR4A3Q92570 626 aa16.56■□□□□ 0.24
TRAPPC11-201ENST00000334690 STC2O76061 302 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 PENKP01210 267 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 MPC1LP0DKB6 136 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 SLC15A1P46059 708 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 TMBIM6P55061 237 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 C6orf141Q5SZD1 244 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 PSAPL1Q6NUJ1 521 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 KBTBD6Q86V97 674 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 FLCNQ8NFG4 579 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 PJA1Q8NG27 643 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 IRF7Q92985 503 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 MOCOSQ96EN8 888 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 RNF31Q96EP0 1072 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 SLC38A3Q99624 504 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 TUBA1CQ9BQE3 449 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 YIPF4Q9BSR8 244 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 SLC22A4Q9H015 551 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 MAP10Q9P2G4 905 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 MKLN1Q9UL63 735 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 DOT1LQ8TEK3 1739 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 IRS2Q9Y4H2 1338 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 J3QRK9 145 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 MMP20O60882 483 aa16.55■□□□□ 0.24
TRAPPC11-201ENST00000334690 CD72P21854 359 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms