RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 MFSD2AQ8NA29 543 aa17.42■□□□□ 0.38
VIM-201ENST00000224237 GPR156Q8NFN8 814 aa17.42■□□□□ 0.38
VIM-201ENST00000224237 NUDT8Q8WV74 236 aa17.42■□□□□ 0.38
VIM-201ENST00000224237 EGLN2Q96KS0 407 aa17.42■□□□□ 0.38
VIM-201ENST00000224237 NECAB3Q96P71 396 aaPredicted RBP17.42■□□□□ 0.38
VIM-201ENST00000224237 MRPS30Q9NP92 439 aaKnown RBP17.42■□□□□ 0.38
VIM-201ENST00000224237 PCDHA9Q9Y5H5 950 aa17.42■□□□□ 0.38
VIM-201ENST00000224237 PLXND1Q9Y4D7 1925 aa17.42■□□□□ 0.38
VIM-201ENST00000224237 NME4O00746 187 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 MAP3K7O43318 606 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 BCAS2O75934 225 aaPredicted RBP17.41■□□□□ 0.38
VIM-201ENST00000224237 ANP32DO95626 131 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 CTSEP14091 401 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 CXCL12P48061 93 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 DMWDQ09019 674 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 PWP1Q13610 501 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 IYDQ6PHW0 289 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 VN1R5Q7Z5H4 357 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 IQCHQ86VS3 1027 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 TRIM48Q8IWZ4 208 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 FAM156AQ8NDB6 213 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 DNAJB14Q8TBM8 379 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 ZFPM2Q8WW38 1151 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 OR52E6Q96RD3 313 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 OR51B5Q9H339 312 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 SLAMF8Q9P0V8 285 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 TAAR2Q9P1P5 351 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 STX18Q9P2W9 335 aaKnown RBP17.41■□□□□ 0.38
VIM-201ENST00000224237 KLF15Q9UIH9 416 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 ABCA7Q8IZY2 2146 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 IGKV1-8A0A0C4DH67 115 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 OR5K4A6NMS3 321 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 K7ESF4 209 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 PCDH7O60245 1069 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 ANXA4P09525 319 aaPredicted RBP17.41■□□□□ 0.38
VIM-201ENST00000224237 MAOBP27338 520 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 CD38P28907 300 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 S100A3P33764 101 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 MSX2P35548 267 aaPredicted RBP17.41■□□□□ 0.38
VIM-201ENST00000224237 ERFP50548 548 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 RACK1P63244 317 aaKnown RBP17.41■□□□□ 0.38
VIM-201ENST00000224237 CSNK1G2P78368 415 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 MS4A2Q01362 244 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 DLEU7Q6UYE1 221 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 SLC36A4Q6YBV0 504 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 MSANTD1Q6ZTZ1 278 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 ADCK2Q7Z695 626 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 KIAA2013Q8IYS2 634 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 OR2L3Q8NG85 312 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 OR4E2Q8NGC2 313 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 DNAJB8Q8NHS0 232 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 SLC26A7Q8TE54 656 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 GTF2H4Q92759 462 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 TMEM125Q96AQ2 219 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 RMND5AQ9H871 391 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 POT1Q9NUX5 634 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 CMTM6Q9NX76 183 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 EML5Q05BV3 1969 aa17.41■□□□□ 0.38
VIM-201ENST00000224237 GNG14A0A1W2PPG7 69 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 ACOT8O14734 319 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 AXIN1O15169 862 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 LRATO95237 230 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 CHRM5P08912 532 aaPredicted RBP17.4■□□□□ 0.38
VIM-201ENST00000224237 HSD17B1P14061 328 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 HRH2P25021 359 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 CMPK1P30085 196 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 PEBP1P30086 187 aaKnown RBP17.4■□□□□ 0.38
VIM-201ENST00000224237 GRK3P35626 688 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 SRSF11Q05519 484 aaKnown RBP17.4■□□□□ 0.38
VIM-201ENST00000224237 TRAP1Q12931 704 aaKnown RBP17.4■□□□□ 0.38
VIM-201ENST00000224237 PLCL1Q15111 1095 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 SF1Q15637 639 aaKnown RBP17.4■□□□□ 0.38
VIM-201ENST00000224237 C6orf10Q5SRN2 563 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 ARMCX6Q7L4S7 300 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 COMMD6Q7Z4G1 85 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 TAF8Q7Z7C8 310 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 GPR180Q86V85 440 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 METTL4Q8N3J2 472 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 ANKRD53Q8N9V6 530 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 HIPK4Q8NE63 616 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 TTLQ8NG68 377 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 SLC22A18Q96BI1 424 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 CGREF1Q99674 301 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 SRMSQ9H3Y6 488 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 AHSPQ9NZD4 102 aa17.4■□□□□ 0.38
VIM-201ENST00000224237 APOBEC3BQ9UH17 382 aaKnown RBP17.4■□□□□ 0.38
VIM-201ENST00000224237 CACNA1IQ9P0X4 2223 aa17.39■□□□□ 0.38
VIM-201ENST00000224237 TRBV23OR9-2A0A075B6M9 112 aa17.39■□□□□ 0.38
VIM-201ENST00000224237 KIR2DS5A0A0G2JLQ3 304 aa17.39■□□□□ 0.38
VIM-201ENST00000224237 A0A0G2JNG1 304 aa17.39■□□□□ 0.38
VIM-201ENST00000224237 FEZF1A0PJY2 475 aa17.39■□□□□ 0.38
VIM-201ENST00000224237 KIR2DS3K7RE56 304 aa17.39■□□□□ 0.38
VIM-201ENST00000224237 SEMA3DO95025 777 aa17.39■□□□□ 0.38
VIM-201ENST00000224237 VIPP01282 170 aa17.39■□□□□ 0.38
VIM-201ENST00000224237 CELA2BP08218 269 aaPredicted RBP17.39■□□□□ 0.38
VIM-201ENST00000224237 BCKDHBP21953 392 aa17.39■□□□□ 0.38
VIM-201ENST00000224237 KIR3DL1P43629 444 aa17.39■□□□□ 0.38
VIM-201ENST00000224237 ZNF763Q0D2J5 394 aa17.39■□□□□ 0.38
VIM-201ENST00000224237 KIR2DS5Q14953 304 aa17.39■□□□□ 0.38
VIM-201ENST00000224237 NANOGP8Q6NSW7 305 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms