RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 C16orf45Q96MC5 204 aaPredicted RBP4.7□□□□□ -1.66
LINC00397-202ENST00000606785 NDNQ99608 321 aa4.7□□□□□ -1.66
LINC00397-202ENST00000606785 DDX50Q9BQ39 737 aaKnown RBP4.7□□□□□ -1.66
LINC00397-202ENST00000606785 FAM213AQ9BRX8 229 aa4.7□□□□□ -1.66
LINC00397-202ENST00000606785 NTPCRQ9BSD7 190 aaKnown RBP4.7□□□□□ -1.66
LINC00397-202ENST00000606785 URM1Q9BTM9 101 aaKnown RBP4.7□□□□□ -1.66
LINC00397-202ENST00000606785 RIMS4Q9H426 269 aaPredicted RBP4.7□□□□□ -1.66
LINC00397-202ENST00000606785 TAS2R3Q9NYW6 316 aa4.7□□□□□ -1.66
LINC00397-202ENST00000606785 MALT1Q9UDY8 824 aa4.7□□□□□ -1.66
LINC00397-202ENST00000606785 UBQLN2Q9UHD9 624 aa4.7□□□□□ -1.66
LINC00397-202ENST00000606785 TSPAN16Q9UKR8 245 aa4.7□□□□□ -1.66
LINC00397-202ENST00000606785 BLOC1S6Q9UL45 172 aa4.7□□□□□ -1.66
LINC00397-202ENST00000606785 CCPG1Q9ULG6 757 aa4.7□□□□□ -1.66
LINC00397-202ENST00000606785 STUB1Q9UNE7 303 aa4.7□□□□□ -1.66
LINC00397-202ENST00000606785 ZNF510Q9Y2H8 683 aa4.7□□□□□ -1.66
LINC00397-202ENST00000606785 PCSK5Q92824 1860 aa4.7□□□□□ -1.66
LINC00397-202ENST00000606785 TRAV18A0A075B6X5 111 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 ASPDHA6ND91 283 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 C2orf81A6NN90 581 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 TLR4O00206 839 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 CPLX1O14810 134 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 SCO2O43819 266 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 CTSVO60911 334 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 HSF2BPO75031 334 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 PIGNO95427 931 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 NEFHP12036 1026 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 ETS1P14921 441 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 CDH3P22223 829 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 CA4P22748 312 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 DGKAP23743 735 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 CASQ1P31415 396 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 SFNP31947 248 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 CDKN1AP38936 164 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 CD151P48509 253 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 B3GALT5-AS1P59052 145 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 GALK2Q01415 458 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 TRAP1Q12931 704 aaKnown RBP4.69□□□□□ -1.66
LINC00397-202ENST00000606785 HSP90B2PQ58FF3 399 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 ZNF549Q6P9A3 640 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 CTR9Q6PD62 1173 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 SIGLEC15Q6ZMC9 328 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 ARMC9Q7Z3E5 817 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 ADCK1Q86TW2 530 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 RTN4RL2Q86UN3 420 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 LAX1Q8IWV1 398 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 ELMOD2Q8IZ81 293 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 KDM8Q8N371 416 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 CCNYQ8ND76 341 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 OR52N5Q8NH56 324 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 OLIG1Q8TAK6 271 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 ZNF473Q8WTR7 871 aaKnown RBP4.69□□□□□ -1.66
LINC00397-202ENST00000606785 CFAP53Q96M91 514 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 CCDC3Q9BQI4 270 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 LRRC1Q9BTT6 524 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 SLC39A8Q9C0K1 460 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 LAT2Q9GZY6 243 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 C10orf88Q9H8K7 445 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 LRRC4Q9HBW1 653 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 FGF21Q9NSA1 209 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 FAM118AQ9NWS6 357 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.69□□□□□ -1.66
LINC00397-202ENST00000606785 SPASTQ9UBP0 616 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 IL16Q14005 1332 aa4.69□□□□□ -1.66
LINC00397-202ENST00000606785 IGHV4OR15-8A0A075B7B6 117 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 TMEM129A0AVI4 362 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 MAGEB16A2A368 324 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 RGSL1A5PLK6 1076 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 DNAJC9-AS1A6NH13 148 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 ANKDD1BA6NHY2 528 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 CD8B2A6NJW9 211 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 XPNPEP2O43895 674 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 PRKRAO75569 313 aaKnown RBP4.68□□□□□ -1.66
LINC00397-202ENST00000606785 TRIM16O95361 564 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 BAG3O95817 575 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 GUCA1CO95843 209 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 IGHV4-39P01824 125 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 APOHP02749 345 aaPredicted RBP4.68□□□□□ -1.66
LINC00397-202ENST00000606785 ACAA1P09110 424 aaPredicted RBP4.68□□□□□ -1.66
LINC00397-202ENST00000606785 GP1BBP13224 206 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 CPA3P15088 417 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 AREGP15514 252 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 UGT1A6P19224 532 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 EPHA2P29317 976 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 CSTF2P33240 577 aaKnown RBP eCLIP4.68□□□□□ -1.66
LINC00397-202ENST00000606785 SFTPDP35247 375 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 CAMLGP49069 296 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 ZNF131P52739 623 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 MAZP56270 477 aaKnown RBP4.68□□□□□ -1.66
LINC00397-202ENST00000606785 HSD17B7P56937 341 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 C21orf58P58505 322 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 HMGN5P82970 282 aaKnown RBP4.68□□□□□ -1.66
LINC00397-202ENST00000606785 LGALS3BPQ08380 585 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 LCP2Q13094 533 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 INAQ16352 499 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 SIRPB2Q5JXA9 342 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 SLC35D3Q5M8T2 416 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 C12orf60Q5U649 245 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 B3GLCTQ6Y288 498 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 CREB3L2Q70SY1 520 aa4.68□□□□□ -1.66
LINC00397-202ENST00000606785 EID3Q8N140 333 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms