RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 DMRT3Q9NQL9 472 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 AHSPQ9NZD4 102 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 OR6C2Q9NZP2 312 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 TMEM181Q9P2C4 612 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 MAP10Q9P2G4 905 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 ICKQ9UPZ9 632 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 POMPQ9Y244 141 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 SIT1Q9Y3P8 196 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 BAHCC1Q9P281 2608 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 USP34Q70CQ2 3546 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 KIR2DS5A0A0G2JLQ3 304 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 A0A0G2JNG1 304 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 A0A1W2PPV9 198 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 XIRP2A4UGR9 3374 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 ANKDD1BA6NHY2 528 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 KIR2DS3K7RE56 304 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 AXIN1O15169 862 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 PSMG1O95456 288 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 SDC1P18827 310 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 AK4P27144 223 aaPredicted RBP13.26□□□□□ -0.29
TPM1-215ENST00000558868 GSTM2P28161 218 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 CMPK1P30085 196 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 S100A3P33764 101 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 GRK3P35626 688 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 C21orf58P58505 322 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 EIF2B5Q13144 721 aaKnown RBP13.26□□□□□ -0.29
TPM1-215ENST00000558868 FZD2Q14332 565 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 PTGR1Q14914 329 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 KIR2DS5Q14953 304 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 RBBP5Q15291 538 aaKnown RBP13.26□□□□□ -0.29
TPM1-215ENST00000558868 PARGQ86W56 976 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 AMIGO1Q86WK6 493 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 SYT12Q8IV01 421 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 TRIM48Q8IWZ4 208 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 SLC22A18ASQ8N1D0 253 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 ENDOVQ8N8Q3 282 aaKnown RBP13.26□□□□□ -0.29
TPM1-215ENST00000558868 LINC01555Q8NAE3 123 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 SLC13A3Q8WWT9 602 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 LCN9Q8WX39 176 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 VPS33AQ96AX1 596 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 CCDC124Q96CT7 223 aaKnown RBP13.26□□□□□ -0.29
TPM1-215ENST00000558868 ACAT2Q9BWD1 397 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 TMEM184CQ9NVA4 438 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 SCHIP1Q9P0W5 487 aaPredicted RBP13.26□□□□□ -0.29
TPM1-215ENST00000558868 SUCOQ9UBS9 1254 aaKnown RBP13.26□□□□□ -0.29
TPM1-215ENST00000558868 SH2B3Q9UQQ2 575 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 DLGAP4Q9Y2H0 992 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 AP3M1Q9Y2T2 418 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 L3MBTL1Q9Y468 752 aa13.26□□□□□ -0.29
TPM1-215ENST00000558868 A6NCN8 305 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 C9JVG2 144 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 SCAMP1O15126 338 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 DNAJA2O60884 412 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 SEMA3DO95025 777 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 KCNH1O95259 989 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 XRCC1P18887 633 aaPredicted RBP13.25□□□□□ -0.29
TPM1-215ENST00000558868 CD38P28907 300 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 RPL3P39023 403 aaKnown RBP13.25□□□□□ -0.29
TPM1-215ENST00000558868 AP2B1P63010 937 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 RACK1P63244 317 aaKnown RBP13.25□□□□□ -0.29
TPM1-215ENST00000558868 SRSF11Q05519 484 aaKnown RBP13.25□□□□□ -0.29
TPM1-215ENST00000558868 TRAP1Q12931 704 aaKnown RBP13.25□□□□□ -0.29
TPM1-215ENST00000558868 MTAPQ13126 283 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 PWP1Q13610 501 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 CEACAM7Q14002 265 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 MAPKAPK3Q16644 382 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 FAM174BQ3ZCQ3 159 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 GALNT18Q6P9A2 607 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 IYDQ6PHW0 289 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 MAMSTRQ6ZN01 415 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 DHDDSQ86SQ9 333 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 PACS2Q86VP3 889 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 NRROSQ86YC3 692 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 RBM12BQ8IXT5 1001 aaKnown RBP13.25□□□□□ -0.29
TPM1-215ENST00000558868 FAM160A2Q8N612 972 aaPredicted RBP13.25□□□□□ -0.29
TPM1-215ENST00000558868 LMNTD1Q8N9Z9 388 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 AVL9Q8NBF6 648 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 SLC6A18Q96N87 628 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 PRPF18Q99633 342 aaKnown RBP13.25□□□□□ -0.29
TPM1-215ENST00000558868 SH3GL1Q99961 368 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 ORAI3Q9BRQ5 295 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 CENPKQ9BS16 269 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 SRMSQ9H3Y6 488 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 XKR8Q9H6D3 395 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 IL1RL2Q9HB29 575 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 MRPS30Q9NP92 439 aaKnown RBP13.25□□□□□ -0.29
TPM1-215ENST00000558868 POT1Q9NUX5 634 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 ABCD2Q9UBJ2 740 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 ANGPTL2Q9UKU9 493 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 SNX7Q9UNH6 387 aa13.25□□□□□ -0.29
TPM1-215ENST00000558868 TRBC2A0A5B9 178 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 FAM221BA6H8Z2 402 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 ASPDHA6ND91 283 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 MAP3K13O43283 966 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 PRICKLE3O43900 615 aaPredicted RBP13.24□□□□□ -0.29
TPM1-215ENST00000558868 VIPP01282 170 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 PGRP06401 933 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 ANXA4P09525 319 aaPredicted RBP13.24□□□□□ -0.29
TPM1-215ENST00000558868 TIA1P31483 386 aaKnown RBP eCLIP13.24□□□□□ -0.29
TPM1-215ENST00000558868 HPCAL1P37235 193 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms