RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 CDCA5Q96FF9 252 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 TRMT2BQ96GJ1 504 aaKnown RBP8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 DCLRE1CQ96SD1 692 aaKnown RBP8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 ADAMTS10Q9H324 1103 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 GAREM1Q9H706 876 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 A0A0G2JMP0 313 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 TMEM72A0PK05 275 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 ARL5CA6NH57 179 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 AQP12BA6NM10 295 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 WASH3PC4AMC7 463 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 PDXKO00764 312 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 SCAMP3O14828 347 aaKnown RBP8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 F9P00740 461 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 MT-ND2P03891 347 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 RHOP08100 348 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 MAPK3P27361 379 aaPredicted RBP8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 AQP1P29972 269 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 VIPR1P32241 457 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 P2RY4P51582 365 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 MPPED2Q15777 294 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 LRRC57Q8N9N7 239 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 SLC22A18Q96BI1 424 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 BRINP2Q9C0B6 783 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 ANKRD19PQ9H560 264 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 MVB12BQ9H7P6 319 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 FKBP7Q9Y680 259 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 MYH7P12883 1935 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 SAMD9Q5K651 1589 aa8.77□□□□□ -1.01
GTF2A1-203ENST00000553612 C8BP07358 591 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 HAPLN1P10915 354 aaPredicted RBP8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 CNTN1Q12860 1018 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 OR8G1Q15617 311 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 CARD16Q5EG05 197 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 KIAA1324Q6UXG2 1013 aaKnown RBP8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 MTSS1LQ765P7 747 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 TERB2Q8NHR7 220 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 HPSE2Q8WWQ2 592 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 UGT2B28Q9BY64 529 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 OR51M1Q9H341 326 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 SEMA4BQ9NPR2 832 aaPredicted RBP8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 PDP1Q9P0J1 537 aaPredicted RBP8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 RCOR3Q9P2K3 495 aaPredicted RBP8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 POLLQ9UGP5 575 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 SLC13A4Q9UKG4 626 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 ZFR2Q9UPR6 939 aaKnown RBP8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 TRPV2Q9Y5S1 764 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 OVOS2A0A0G2JMS6 1433 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 SEPT4O43236 478 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 KIAA0513O60268 411 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 CBSLP0DN79 551 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 CBSP35520 551 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 RBP2P50120 134 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 TARBP2Q15633 366 aaKnown RBP8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 PLA2G4FQ68DD2 849 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 CXorf57Q6NSI4 855 aaKnown RBP8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 B3GALNT2Q8NCR0 500 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 TMBIM1Q969X1 311 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 NELL2Q99435 816 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 PKMYT1Q99640 499 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 ASB7Q9H672 318 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 OR5K3A6NET4 321 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 F2P00734 622 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 FGF4P08620 206 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 CSH1P0DML2 217 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 CSH2P0DML3 217 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 BMP2P12643 396 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 CD72P21854 359 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 TUBG1P23258 451 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 RPL22P35268 128 aaKnown RBP8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 LIMK2P53671 638 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 EIF4HQ15056 248 aaKnown RBP8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 GPR153Q6NV75 609 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 DCLRE1AQ6PJP8 1040 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 IRF2BP2Q7Z5L9 587 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 ADHFE1Q8IWW8 467 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 OR13F1Q8NGS4 319 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 ITCHQ96J02 903 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 ZNF641Q96N77 438 aaPredicted RBP8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 YTHDF1Q9BYJ9 559 aaKnown RBP8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 TXLNGYQ9BZA5 131 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 OPA3Q9H6K4 179 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 AKIP1Q9NQ31 210 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 MRPL22Q9NWU5 206 aaKnown RBP8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 RPS6KA6Q9UK32 745 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 CASC3O15234 703 aaKnown RBP8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 NCR1O76036 304 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 ENPP2Q13822 863 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 FAM74A1Q5RGS3 127 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 C6orf141Q5SZD1 244 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 ZNF529Q6P280 563 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 DNAJC10Q8IXB1 793 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 FAM126BQ8IXS8 530 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 UNC5BQ8IZJ1 945 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 TFAP2CQ92754 450 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 HBEGFQ99075 208 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 SLC38A3Q99624 504 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 SEPT5Q99719 369 aaPredicted RBP8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 LXNQ9BS40 222 aa8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 POLR3FQ9H1D9 316 aaPredicted RBP8.76□□□□□ -1.01
GTF2A1-203ENST00000553612 BCO1Q9HAY6 547 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms