RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 C9orf43Q8TAL5 461 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 MPLKIPQ8TAP9 179 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 LARP4BQ92615 738 aaKnown RBP4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 PPP1R13BQ96KQ4 1090 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 CNOT6LQ96LI5 555 aaKnown RBP4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 LRRC3BQ96PB8 259 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 SEMA3CQ99985 751 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 DESI2Q9BSY9 194 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 FUT8Q9BYC5 575 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 AAMDCQ9H7C9 122 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 PPP1R3EQ9H7J1 279 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 FZD3Q9NPG1 666 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 SIRT3Q9NTG7 399 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 ACSS1Q9NUB1 689 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 IL36RNQ9UBH0 155 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 GAGE2DQ9UEU5 116 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 STX8Q9UNK0 236 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 LIPGQ9Y5X9 500 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 PTPRDP23468 1912 aa4.56□□□□□ -1.68
HMGB1P23-201ENST00000518743 A0A0U1RQK1 487 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 ZNF320A2RRD8 509 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 IFNL4K9M1U5 179 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 PRRG2O14669 202 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 ZNF197O14709 1029 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 PLRG1O43660 514 aaKnown RBP4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 PRKCGP05129 697 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 KRT7P08729 469 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 HSPD1P10809 573 aaKnown RBP4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 CHRNB2P17787 502 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 ACHEP22303 614 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 GNLYP22749 145 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 U2AF2P26368 475 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 CCND2P30279 289 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 P2RY2P41231 377 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 NAGLUP54802 743 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 TUBB2AQ13885 445 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 DLG2Q15700 870 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 ITPRIPL2Q3MIP1 535 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 FAM98BQ52LJ0 330 aaKnown RBP4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 SPDYCQ5MJ68 293 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 Q5PR19 223 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 C6orf136Q5SQH8 315 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 CYP4A22Q5TCH4 519 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 LINC00696Q6ZRV3 163 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 CLEC17AQ6ZS10 378 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 MON1BQ7L1V2 547 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 SPATA21Q7Z572 469 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 SPRED1Q7Z699 444 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 MRGPRGQ86SM5 289 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 ANKRD13BQ86YJ7 626 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 CREBRFQ8IUR6 639 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 FAM114A1Q8IWE2 563 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 SLC34A3Q8N130 599 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 RBM15BQ8NDT2 890 aaKnown RBP4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 CTCFLQ8NI51 663 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 HM13Q8TCT9 377 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 PDCD6IPQ8WUM4 868 aaKnown RBP4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 ROBO4Q8WZ75 1007 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 EXOC4Q96A65 974 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 TCEAL4Q96EI5 215 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 HES6Q96HZ4 224 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 SIGLEC11Q96RL6 698 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 DDOQ99489 341 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 TUBB2BQ9BVA1 445 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 PIGMQ9H3S5 423 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 RAD21L1Q9H4I0 556 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 FAM124BQ9H5Z6 455 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 CATSPERBQ9H7T0 1116 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 IL1RAPL2Q9NP60 686 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 TAS2R14Q9NYV8 317 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 SNX7Q9UNH6 387 aa4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 TMEM184BQ9Y519 407 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P23-201ENST00000518743 MYO16Q9Y6X6 1858 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 NCANO14594 1321 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 ZNF532Q9HCE3 1301 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 SMIM35A0A1B0GVV1 85 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 LRRD1A4D1F6 860 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 OOEPA6NGQ2 149 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 OR6C76A6NM76 312 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 H0YAE9 185 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 SPINT2O43291 252 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 FMO6PO60774 539 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 GOSR1O95249 250 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 PENKP01210 267 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 THEGLP0DJG4 465 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 SOAT1P35610 550 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 CRYBB1P53674 252 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 RBPJQ06330 500 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 INPP5JQ15735 1006 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 SMN1Q16637 294 aaKnown RBP4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 MEP1AQ16819 746 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 MEP1BQ16820 701 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 FUT11Q495W5 492 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 TWF2Q6IBS0 349 aaKnown RBP4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 TMEM211Q6ICI0 200 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 TMEM71Q6P5X7 295 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 CTR9Q6PD62 1173 aa4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 PRSS55Q6UWB4 352 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P23-201ENST00000518743 OLFML1Q6UWY5 402 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms