RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TLR8Q9NR97 1041 aaKnown RBP17.19■□□□□ 0.34
NUP54-205ENST00000507257 FAM120CQ9NX05 1096 aaKnown RBP17.19■□□□□ 0.34
NUP54-205ENST00000507257 ABI2Q9NYB9 513 aaPredicted RBP17.19■□□□□ 0.34
NUP54-205ENST00000507257 SLC12A8A0AV02 714 aa17.18■□□□□ 0.34
NUP54-205ENST00000507257 CCRL2O00421 344 aa17.18■□□□□ 0.34
NUP54-205ENST00000507257 FPGTO14772 594 aa17.18■□□□□ 0.34
NUP54-205ENST00000507257 SCN2BO60939 215 aa17.18■□□□□ 0.34
NUP54-205ENST00000507257 PDYNP01213 254 aa17.18■□□□□ 0.34
NUP54-205ENST00000507257 ABCB1P08183 1280 aaPredicted RBP17.18■□□□□ 0.34
NUP54-205ENST00000507257 GDF5P43026 501 aa17.18■□□□□ 0.34
NUP54-205ENST00000507257 RFX2P48378 723 aa17.18■□□□□ 0.34
NUP54-205ENST00000507257 BNC1Q01954 994 aa17.18■□□□□ 0.34
NUP54-205ENST00000507257 ST3GAL4Q11206 333 aa17.18■□□□□ 0.34
NUP54-205ENST00000507257 DUSP7Q16829 419 aa17.18■□□□□ 0.34
NUP54-205ENST00000507257 SOWAHCQ53LP3 525 aaPredicted RBP17.18■□□□□ 0.34
NUP54-205ENST00000507257 SGO1Q5FBB7 561 aa17.18■□□□□ 0.34
NUP54-205ENST00000507257 FAM209AQ5JX71 171 aa17.18■□□□□ 0.34
NUP54-205ENST00000507257 LIX1LQ8IVB5 337 aa17.18■□□□□ 0.34
NUP54-205ENST00000507257 RBFAQ8N0V3 343 aa17.18■□□□□ 0.34
NUP54-205ENST00000507257 OR7D4Q8NG98 312 aa17.18■□□□□ 0.34
NUP54-205ENST00000507257 NPLOC4Q8TAT6 608 aa17.18■□□□□ 0.34
NUP54-205ENST00000507257 GPR83Q9NYM4 423 aa17.18■□□□□ 0.34
NUP54-205ENST00000507257 KCNE1BA0A087WTH5 132 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 MAGEB17A8MXT2 336 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 GFRA2O00451 464 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 SEC14L5O43304 696 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 OAZ2O95190 189 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 POMCP01189 267 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 DNTTP04053 509 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 CYP2A7P20853 494 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 ENDOUP21128 410 aaKnown RBP17.17■□□□□ 0.34
NUP54-205ENST00000507257 PPIBP23284 216 aaKnown RBP17.17■□□□□ 0.34
NUP54-205ENST00000507257 GJA5P36382 358 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 CDH4P55283 916 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 MOB2Q70IA6 237 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 FAM181AQ8N9Y4 354 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 OR8J2Q8NGG1 315 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 HASPINQ8TF76 798 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 SELENOMQ8WWX9 145 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 CDCA5Q96FF9 252 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 TSSK3Q96PN8 268 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 SMIM14Q96QK8 99 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 CHST8Q9H2A9 424 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 SLC32A1Q9H598 525 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 BPIFA1Q9NP55 256 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 LATS2Q9NRM7 1088 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 ADPRHL2Q9NX46 363 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 ENOPH1Q9UHY7 261 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 CORO2BQ9UQ03 480 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 V9GYH0 126 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 MEIOCA2RUB1 952 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 CTDSP2O14595 271 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 TPD52L2O43399 206 aaKnown RBP17.17■□□□□ 0.34
NUP54-205ENST00000507257 MPZL2O60487 215 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 TBX18O95935 607 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 PIPP12273 146 aaPredicted RBP17.17■□□□□ 0.34
NUP54-205ENST00000507257 TACR1P25103 407 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 RRM2P31350 389 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 HMGCLP35914 325 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 ELOAQ14241 798 aaKnown RBP17.17■□□□□ 0.34
NUP54-205ENST00000507257 TBRG1Q3YBR2 411 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 GPRC6AQ5T6X5 926 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 PDE12Q6L8Q7 609 aaKnown RBP17.17■□□□□ 0.34
NUP54-205ENST00000507257 LRRC70Q7Z2Q7 622 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 NOXA1Q86UR1 476 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 GATAD2AQ86YP4 633 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 MIB1Q86YT6 1006 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 ZBTB2Q8N680 514 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 EFHBQ8N7U6 833 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 OR4C15Q8NGM1 316 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 MAGEB10Q96LZ2 347 aaPredicted RBP17.17■□□□□ 0.34
NUP54-205ENST00000507257 PANX1Q96RD7 426 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 MCCC1Q96RQ3 725 aaPredicted RBP17.17■□□□□ 0.34
NUP54-205ENST00000507257 FEVQ99581 238 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 MGLLQ99685 303 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 DOHHQ9BU89 302 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 GON7Q9BXV9 100 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 ERVK13-1Q9NX77 482 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 Q9Y3F1 56 aa17.17■□□□□ 0.34
NUP54-205ENST00000507257 ZNF106Q9H2Y7 1883 aaKnown RBP17.16■□□□□ 0.34
NUP54-205ENST00000507257 SUV39H1O43463 412 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 EPORP19235 508 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 PCGF2P35227 344 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 WNT3P56703 355 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 GALK2Q01415 458 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 ZNF33BQ06732 778 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 PPIGQ13427 754 aaKnown RBP eCLIP17.16■□□□□ 0.34
NUP54-205ENST00000507257 C10orf120Q5SQS8 335 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 ARMC4Q5T2S8 1044 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 LYPLAL1Q5VWZ2 237 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 LRRC66Q68CR7 880 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 PLEKHH3Q7Z736 793 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 SAPCD2Q86UD0 394 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 OR8H2Q8N162 312 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 SLC7A6Q92536 515 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 TRAF4Q9BUZ4 470 aaPredicted RBP17.16■□□□□ 0.34
NUP54-205ENST00000507257 RAD18Q9NS91 495 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 C14orf119Q9NWQ9 140 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 KLHL42Q9P2K6 505 aa17.16■□□□□ 0.34
NUP54-205ENST00000507257 CARD8Q9Y2G2 431 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms