RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 LCTLQ6UWM7 567 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 CYS1Q717R9 158 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 VN1R4Q7Z5H5 301 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 CCDC25Q86WR0 208 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 C17orf64Q86WR6 236 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 NKAPQ8N5F7 415 aaKnown RBP12.28□□□□□ -0.44
HDAC1-209ENST00000484305 OR56A3Q8NH54 315 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 ANKRD49Q8WVL7 239 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 FBXL8Q96CD0 374 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 OR4K3Q96R72 315 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 MACROD1Q9BQ69 325 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 LRRC1Q9BTT6 524 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 TRIM54Q9BYV2 358 aa12.28□□□□□ -0.44
HDAC1-209ENST00000484305 NXT1Q9UKK6 140 aaKnown RBP12.28□□□□□ -0.44
HDAC1-209ENST00000484305 MRPS2Q9Y399 296 aaKnown RBP12.28□□□□□ -0.44
HDAC1-209ENST00000484305 KCNE1BA0A087WTH5 132 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 A0A0A6YYC8 382 aaPredicted RBP12.27□□□□□ -0.45
HDAC1-209ENST00000484305 PABPN1LA6NDY0 278 aaKnown RBP12.27□□□□□ -0.45
HDAC1-209ENST00000484305 NPEPPSL1A6NEC2 478 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 I3L1I5 382 aaPredicted RBP12.27□□□□□ -0.45
HDAC1-209ENST00000484305 AGPSO00116 658 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 TXNDC9O14530 226 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 SOCS6O14544 535 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 FFAR3O14843 346 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 GPR42O15529 346 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 FOXS1O43638 330 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 LCMT2O60294 686 aaKnown RBP12.27□□□□□ -0.45
HDAC1-209ENST00000484305 ZGLP1P0C6A0 271 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 FBLP22087 321 aaKnown RBP12.27□□□□□ -0.45
HDAC1-209ENST00000484305 MAGEA4P43358 317 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 RPS15AP62244 130 aaKnown RBP12.27□□□□□ -0.45
HDAC1-209ENST00000484305 KLC1Q07866 573 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 VWA2Q5GFL6 755 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 GARNL3Q5VVW2 1013 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 PRSS58Q8IYP2 241 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 AMER3Q8N944 861 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 TEX19Q8NA77 164 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 STT3BQ8TCJ2 826 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 ZNF592Q92610 1267 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 CDKL2Q92772 493 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 MMABQ96EY8 250 aaPredicted RBP12.27□□□□□ -0.45
HDAC1-209ENST00000484305 FER1L6-AS2Q96M78 137 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 RBBP8Q99708 897 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 CPNE1Q99829 537 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 MESP1Q9BRJ9 268 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 PHACTR1Q9C0D0 580 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 CAB39LQ9H9S4 337 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 LRRC4CQ9HCJ2 640 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 GPAMQ9HCL2 828 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 GPR83Q9NYM4 423 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 ZNF282Q9UDV7 671 aaPredicted RBP12.27□□□□□ -0.45
HDAC1-209ENST00000484305 CDC14AQ9UNH5 594 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 NOVA2Q9UNW9 492 aaKnown RBP12.27□□□□□ -0.45
HDAC1-209ENST00000484305 HS3ST3B1Q9Y662 390 aa12.27□□□□□ -0.45
HDAC1-209ENST00000484305 NBASA2RRP1 2371 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 IGLV3-12A0A075B6K2 115 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 ALOX12BO75342 701 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 WISP1O95388 367 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 WISP3O95389 354 aaPredicted RBP12.26□□□□□ -0.45
HDAC1-209ENST00000484305 GSTA2P09210 222 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 SLC26A3P40879 764 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 BCL6P41182 706 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 SLC12A2P55011 1212 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 POU4F1Q01851 419 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 MEF2AQ02078 507 aaPredicted RBP12.26□□□□□ -0.45
HDAC1-209ENST00000484305 OCA2Q04671 838 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 DSG2Q14126 1118 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 TSNQ15631 228 aaKnown RBP12.26□□□□□ -0.45
HDAC1-209ENST00000484305 SYT16Q17RD7 645 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 KBTBD12Q3ZCT8 623 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 C8orf74Q6P047 294 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 KIRREL2Q6UWL6 708 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 LAPTM4BQ86VI4 370 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 GALNT16Q8N428 558 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 SPATA6LQ8N4H0 392 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 CLEC1AQ8NC01 280 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 ATL1Q8WXF7 558 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 ANKRD7Q92527 254 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 NACC2Q96BF6 587 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 MIEF2Q96C03 454 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 TM4SF19Q96DZ7 209 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 MVB12AQ96EY5 273 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 SMAD5Q99717 465 aaKnown RBP12.26□□□□□ -0.45
HDAC1-209ENST00000484305 HAUS8Q9BT25 410 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 YIPF2Q9BWQ6 316 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 UNKQ9C0B0 810 aaKnown RBP12.26□□□□□ -0.45
HDAC1-209ENST00000484305 DRC3Q9H069 523 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 POPDC3Q9HBV1 291 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 SEMA3GQ9NS98 782 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 TXNDC16Q9P2K2 825 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 TRPC4Q9UBN4 977 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 FBXL4Q9UKA2 621 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 ZNF451Q9Y4E5 1061 aa12.26□□□□□ -0.45
HDAC1-209ENST00000484305 SPENQ96T58 3664 aaKnown RBP12.25□□□□□ -0.45
HDAC1-209ENST00000484305 PHGDHO43175 533 aaKnown RBP12.25□□□□□ -0.45
HDAC1-209ENST00000484305 FAM155BO75949 473 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 IGHEP01854 428 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 ANXA5P08758 320 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 GP5P40197 560 aa12.25□□□□□ -0.45
HDAC1-209ENST00000484305 CSRP3P50461 194 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms