RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 FAM53BQ14153 422 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 CCDC181Q5TID7 509 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 AADACL2Q6P093 401 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 TTC23LQ6PF05 361 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 AFTPHQ6ULP2 937 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 SUSD1Q6UWL2 747 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 PRSS41Q7RTY9 318 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 CD163Q86VB7 1156 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 CHDHQ8NE62 594 aaPredicted RBP16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 OR9A4Q8NGU2 314 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 OR4L1Q8NH43 312 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 FAM57AQ8TBR7 257 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 M1APQ8TC57 530 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 METTL21AQ8WXB1 218 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 LRRC45Q96CN5 670 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 LIME1Q9H400 295 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 MMP25Q9NPA2 562 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 EFR3BQ9Y2G0 817 aa16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 PHF3Q92576 2039 aaKnown RBP16.19■□□□□ 0.18
UBE2D4-209ENST00000454428 F8W8V4 182 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 NME2P1O60361 137 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 PHF2O75151 1096 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 VPS26AO75436 327 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 NME2P22392 152 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 COPS2P61201 443 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 OC90Q02509 493 aaPredicted RBP16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 TSTD2Q5T7W7 516 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 EID3Q8N140 333 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 OR52K1Q8NGK4 314 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 NINJ1Q92982 152 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 CCDC42Q96M95 316 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 OLFM1Q99784 485 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 TSSK1BQ9BXA7 367 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 OSBPL8Q9BZF1 889 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 P2RY12Q9H244 342 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 MRPS30Q9NP92 439 aaKnown RBP16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 ABHD10Q9NUJ1 306 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 SPATA7Q9P0W8 599 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 LRFN1Q9P244 771 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 MARCH4Q9P2E8 410 aaPredicted RBP16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 GNPTGQ9UJJ9 305 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 TFR2Q9UP52 801 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 SCN3AQ9NY46 2000 aa16.18■□□□□ 0.18
UBE2D4-209ENST00000454428 A0A1B0GTH9 108 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 SOWAHDA6NJG2 315 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 SLC25A12O75746 678 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 STATHP02808 62 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 CYC1P08574 325 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 CHRNB4P30926 498 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 PTPN7P35236 360 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 GDF10P55107 478 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 NAA25Q14CX7 972 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 TMED2Q15363 201 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 MAPKAPK3Q16644 382 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 MINDY4Q4G0A6 757 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 RAB42Q8N4Z0 105 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 TAB3Q8N5C8 712 aaPredicted RBP16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 FAM71DQ8N9W8 422 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 FAM98AQ8NCA5 519 aaKnown RBP16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 ASB5Q8WWX0 329 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 GBP4Q96PP9 640 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 TTC1Q99614 292 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 ZNF358Q9NW07 568 aa16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 C19orf25Q9UFG5 118 aaPredicted RBP16.17■□□□□ 0.18
UBE2D4-209ENST00000454428 PRMT5O14744 637 aaPredicted RBP16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 SUN1O94901 812 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 TPOP07202 933 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 CTNNA2P26232 953 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 CTNNA1P35221 906 aaKnown RBP16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 PTGS2P35354 604 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 CCNFP41002 786 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 NR0B1P51843 470 aaKnown RBP16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 PPP2R2AP63151 447 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 FOLH1Q04609 750 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 CEBPEQ15744 281 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 EXT1Q16394 746 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 EMC4Q5J8M3 183 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 CES4AQ5XG92 561 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 C11orf63Q6NUN7 778 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 PLD3Q8IV08 490 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 CCDC71Q8IV32 467 aaPredicted RBP16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 OR6P1Q8NGX9 317 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 OR51Q1Q8NH59 317 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 ANP32EQ9BTT0 268 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 CDCP1Q9H5V8 836 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 TRIM45Q9H8W5 580 aaPredicted RBP16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 KCNJ16Q9NPI9 418 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 PCYOX1Q9UHG3 505 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 ST6GALNAC2Q9UJ37 374 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 RIMKLBQ9ULI2 386 aa16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.16■□□□□ 0.18
UBE2D4-209ENST00000454428 DNAJC13O75165 2243 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 ZNF407Q9C0G0 2248 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 H0YIG0 161 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 HAT1O14929 419 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 CTAG2O75638 210 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 MATN4O95460 622 aa16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 EZRP15311 586 aaKnown RBP16.15■□□□□ 0.18
UBE2D4-209ENST00000454428 GRIA1P42261 906 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms