RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 PTGFRNQ9P2B2 879 aa19.98■□□□□ 0.79
VSX1-206ENST00000444511 TRMT6Q9UJA5 497 aaKnown RBP19.98■□□□□ 0.79
VSX1-206ENST00000444511 WIPF3A6NGB9 483 aa19.97■□□□□ 0.79
VSX1-206ENST00000444511 P2RX6O15547 441 aa19.97■□□□□ 0.79
VSX1-206ENST00000444511 SERPINA7P05543 415 aa19.97■□□□□ 0.79
VSX1-206ENST00000444511 HRH2P25021 359 aa19.97■□□□□ 0.79
VSX1-206ENST00000444511 AVPR1BP47901 424 aa19.97■□□□□ 0.79
VSX1-206ENST00000444511 FNTAP49354 379 aa19.97■□□□□ 0.79
VSX1-206ENST00000444511 ARG2P78540 354 aa19.97■□□□□ 0.79
VSX1-206ENST00000444511 FAM53BQ14153 422 aa19.97■□□□□ 0.79
VSX1-206ENST00000444511 PPP1R7Q15435 360 aa19.97■□□□□ 0.79
VSX1-206ENST00000444511 SYT16Q17RD7 645 aa19.97■□□□□ 0.79
VSX1-206ENST00000444511 LRRC8EQ6NSJ5 796 aa19.97■□□□□ 0.79
VSX1-206ENST00000444511 UGT3A1Q6NUS8 523 aa19.97■□□□□ 0.79
VSX1-206ENST00000444511 MAMDC2Q7Z304 686 aaPredicted RBP19.97■□□□□ 0.79
VSX1-206ENST00000444511 ARHGEF39Q8N4T4 335 aa19.97■□□□□ 0.79
VSX1-206ENST00000444511 CATSPER1Q8NEC5 780 aa19.97■□□□□ 0.79
VSX1-206ENST00000444511 GABPB2Q8TAK5 448 aaPredicted RBP19.97■□□□□ 0.79
VSX1-206ENST00000444511 MCOLN3Q8TDD5 553 aa19.97■□□□□ 0.79
VSX1-206ENST00000444511 BRIX1Q8TDN6 353 aaKnown RBP19.97■□□□□ 0.79
VSX1-206ENST00000444511 MKL2Q9ULH7 1088 aa19.97■□□□□ 0.79
VSX1-206ENST00000444511 IGHV1-45A0A0A0MS14 117 aa19.96■□□□□ 0.79
VSX1-206ENST00000444511 A0A1W2PQ72 361 aa19.96■□□□□ 0.79
VSX1-206ENST00000444511 DYTNA2CJ06 578 aa19.96■□□□□ 0.79
VSX1-206ENST00000444511 PGAM1P18669 254 aa19.96■□□□□ 0.79
VSX1-206ENST00000444511 RGS4P49798 205 aa19.96■□□□□ 0.79
VSX1-206ENST00000444511 TBPL1P62380 186 aa19.96■□□□□ 0.79
VSX1-206ENST00000444511 MAT1AQ00266 395 aaKnown RBP19.96■□□□□ 0.79
VSX1-206ENST00000444511 FAM180AQ6UWF9 173 aa19.96■□□□□ 0.79
VSX1-206ENST00000444511 ZC3H7AQ8IWR0 971 aaKnown RBP19.96■□□□□ 0.79
VSX1-206ENST00000444511 PALM2Q8IXS6 379 aa19.96■□□□□ 0.79
VSX1-206ENST00000444511 OR1N1Q8NGS0 311 aa19.96■□□□□ 0.79
VSX1-206ENST00000444511 ACTRT1Q8TDG2 376 aa19.96■□□□□ 0.79
VSX1-206ENST00000444511 FAR1Q8WVX9 515 aa19.96■□□□□ 0.79
VSX1-206ENST00000444511 OSBPL9Q96SU4 736 aa19.96■□□□□ 0.79
VSX1-206ENST00000444511 NDNQ99608 321 aa19.96■□□□□ 0.79
VSX1-206ENST00000444511 TMEM184CQ9NVA4 438 aa19.96■□□□□ 0.79
VSX1-206ENST00000444511 WFS1O76024 890 aa19.95■□□□□ 0.78
VSX1-206ENST00000444511 BMP10O95393 424 aa19.95■□□□□ 0.78
VSX1-206ENST00000444511 STATHP02808 62 aa19.95■□□□□ 0.78
VSX1-206ENST00000444511 EDN3P14138 238 aa19.95■□□□□ 0.78
VSX1-206ENST00000444511 SOX11P35716 441 aa19.95■□□□□ 0.78
VSX1-206ENST00000444511 RPS15AP62244 130 aaKnown RBP19.95■□□□□ 0.78
VSX1-206ENST00000444511 CRYMQ14894 314 aa19.95■□□□□ 0.78
VSX1-206ENST00000444511 RNASEH2BQ5TBB1 312 aaKnown RBP19.95■□□□□ 0.78
VSX1-206ENST00000444511 RIPOR1Q6ZS17 1223 aa19.95■□□□□ 0.78
VSX1-206ENST00000444511 SLC35F6Q8N357 371 aa19.95■□□□□ 0.78
VSX1-206ENST00000444511 SIRT6Q8N6T7 355 aa19.95■□□□□ 0.78
VSX1-206ENST00000444511 OR9A4Q8NGU2 314 aa19.95■□□□□ 0.78
VSX1-206ENST00000444511 EEF1AKMT1Q8WVE0 214 aa19.95■□□□□ 0.78
VSX1-206ENST00000444511 PSMF1Q92530 271 aa19.95■□□□□ 0.78
VSX1-206ENST00000444511 CCDC138Q96M89 665 aa19.95■□□□□ 0.78
VSX1-206ENST00000444511 PCBD2Q9H0N5 130 aa19.95■□□□□ 0.78
VSX1-206ENST00000444511 TAS2R13Q9NYV9 303 aa19.95■□□□□ 0.78
VSX1-206ENST00000444511 ASIC3Q9UHC3 531 aa19.95■□□□□ 0.78
VSX1-206ENST00000444511 MRPS2Q9Y399 296 aaKnown RBP19.95■□□□□ 0.78
VSX1-206ENST00000444511 DOCK10Q96BY6 2186 aa19.94■□□□□ 0.78
VSX1-206ENST00000444511 E2F3O00716 465 aa19.94■□□□□ 0.78
VSX1-206ENST00000444511 CLDN1O95832 211 aa19.94■□□□□ 0.78
VSX1-206ENST00000444511 C8GP07360 202 aa19.94■□□□□ 0.78
VSX1-206ENST00000444511 AP2B1P63010 937 aa19.94■□□□□ 0.78
VSX1-206ENST00000444511 RPUSD3Q6P087 351 aaKnown RBP19.94■□□□□ 0.78
VSX1-206ENST00000444511 MYO1HQ8N1T3 1032 aa19.94■□□□□ 0.78
VSX1-206ENST00000444511 C2CD4AQ8NCU7 369 aaPredicted RBP19.94■□□□□ 0.78
VSX1-206ENST00000444511 METTL21AQ8WXB1 218 aa19.94■□□□□ 0.78
VSX1-206ENST00000444511 MAGEB10Q96LZ2 347 aaPredicted RBP19.94■□□□□ 0.78
VSX1-206ENST00000444511 ZNF700Q9H0M5 742 aa19.94■□□□□ 0.78
VSX1-206ENST00000444511 PLA2G3Q9NZ20 509 aa19.94■□□□□ 0.78
VSX1-206ENST00000444511 ADAMTS6Q9UKP5 1117 aa19.94■□□□□ 0.78
VSX1-206ENST00000444511 PDE10AQ9Y233 779 aa19.94■□□□□ 0.78
VSX1-206ENST00000444511 OSGIN2Q9Y236 505 aa19.94■□□□□ 0.78
VSX1-206ENST00000444511 HIVEP3Q5T1R4 2406 aa19.94■□□□□ 0.78
VSX1-206ENST00000444511 KCNE1BA0A087WTH5 132 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 NBPF19A0A087WUL8 3843 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 LOC102723996A0A087X1L8 192 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 H0YIG0 161 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 TTC4O95801 387 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 C8orf89P0DMQ9 161 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 ICAM2P13598 275 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 SP140Q13342 867 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 PCOLCEQ15113 449 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 SPANXN3Q5MJ09 141 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 MFSD4BQ5TF39 518 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 AGTRAPQ6RW13 159 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 TMEM205Q6UW68 189 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 VN1R4Q7Z5H5 301 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 C17orf64Q86WR6 236 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 BCORP1Q8N888 145 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 ALKBH8Q96BT7 664 aaKnown RBP19.93■□□□□ 0.78
VSX1-206ENST00000444511 THAP11Q96EK4 314 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 PARVBQ9HBI1 364 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 OLAHQ9NV23 265 aa19.93■□□□□ 0.78
VSX1-206ENST00000444511 TRAV17A0A0B4J275 112 aa19.92■□□□□ 0.78
VSX1-206ENST00000444511 NSA2O95478 260 aaKnown RBP19.92■□□□□ 0.78
VSX1-206ENST00000444511 CELA2AP08217 269 aa19.92■□□□□ 0.78
VSX1-206ENST00000444511 CCND1P24385 295 aa19.92■□□□□ 0.78
VSX1-206ENST00000444511 COL8A1P27658 744 aa19.92■□□□□ 0.78
VSX1-206ENST00000444511 TNFSF10P50591 281 aa19.92■□□□□ 0.78
VSX1-206ENST00000444511 SNRPNP63162 240 aaKnown RBP19.92■□□□□ 0.78
VSX1-206ENST00000444511 CSNK1G2P78368 415 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms