RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 FOPNLQ96NB1 174 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 OPALINQ96PE5 141 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 PCYT2Q99447 389 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 TAPBPLQ9BX59 468 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 GLOD4Q9HC38 313 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 GALPQ9UBC7 116 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 ENOPH1Q9UHY7 261 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 ASB1Q9Y576 335 aa12.4□□□□□ -0.42
HERC3-203ENST00000407637 MRPL42Q9Y6G3 142 aaKnown RBP12.4□□□□□ -0.42
HERC3-203ENST00000407637 IQCMA0A1B0GVH7 501 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 SLC7A4O43246 635 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 ECI2O75521 394 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 FAM157BP0CG42 384 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 IL1RNP18510 177 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 ZP3P21754 424 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 SSTR2P30874 369 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 TSNQ15631 228 aaKnown RBP12.4□□□□□ -0.43
HERC3-203ENST00000407637 SLC10A6Q3KNW5 377 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 MLIPQ5VWP3 458 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 LRRC66Q68CR7 880 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 LRFN4Q6PJG9 635 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 GPRIN3Q6ZVF9 776 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 CHMP1BQ7LBR1 199 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 BBS7Q8IWZ6 715 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 SLC34A3Q8N130 599 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 C19orf18Q8NEA5 215 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 OR6M1Q8NGM8 313 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 SLC9A6Q92581 669 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 SGTBQ96EQ0 304 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 FCRL5Q96RD9 977 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 CCM2Q9BSQ5 444 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 CDCA7Q9BWT1 371 aaPredicted RBP12.4□□□□□ -0.43
HERC3-203ENST00000407637 GABARAPL3Q9BY60 117 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 HHATLQ9HCP6 504 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 ZFP64Q9NPA5 681 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 MALT1Q9UDY8 824 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 UBQLN2Q9UHD9 624 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 ZNF112Q9UJU3 913 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 PCTPQ9UKL6 214 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 COPS3Q9UNS2 423 aa12.4□□□□□ -0.43
HERC3-203ENST00000407637 CFAP20Q9Y6A4 193 aaKnown RBP12.4□□□□□ -0.43
HERC3-203ENST00000407637 KHNYNO15037 678 aaKnown RBP12.39□□□□□ -0.43
HERC3-203ENST00000407637 ORC5O43913 435 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 FZD6O60353 706 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 OR1I1O60431 355 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 KERAO60938 352 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 FABP3P05413 133 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 IQCF3P0C7M6 154 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 FOSL1P15407 271 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 PTPRAP18433 802 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 CCNCP24863 283 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 APEX1P27695 318 aaKnown RBP12.39□□□□□ -0.43
HERC3-203ENST00000407637 AKT1P31749 480 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 HTR7P34969 479 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 CLCN3P51790 818 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 PTPN5P54829 565 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 ABATP80404 500 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 HNRNPA0Q13151 305 aaKnown RBP12.39□□□□□ -0.43
HERC3-203ENST00000407637 FCN2Q15485 313 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 ZNF284Q2VY69 593 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 RFTN2Q52LD8 501 aaPredicted RBP12.39□□□□□ -0.43
HERC3-203ENST00000407637 IL27RAQ6UWB1 636 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 FAM124AQ86V42 546 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 OR52B6Q8NGF0 335 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 WDR36Q8NI36 951 aaKnown RBP12.39□□□□□ -0.43
HERC3-203ENST00000407637 RHEBL1Q8TAI7 183 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 WNT8BQ93098 351 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 REEP1Q9H902 201 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 TMEM45AQ9NWC5 275 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 MS4A12Q9NXJ0 267 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 ZNF226Q9NYT6 803 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 FAM8A1Q9UBU6 413 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 ING4Q9UNL4 249 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 PRR23AA6NEV1 266 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 IFRD1O00458 451 aaPredicted RBP12.39□□□□□ -0.43
HERC3-203ENST00000407637 LYRM1O43325 122 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 MPC2O95563 127 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 TSPAN12O95859 305 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 IFNA7P01567 189 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 ACSM4P0C7M7 580 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 SLC2A2P11168 524 aaPredicted RBP12.39□□□□□ -0.43
HERC3-203ENST00000407637 HOXB1P14653 301 aaPredicted RBP12.39□□□□□ -0.43
HERC3-203ENST00000407637 NDUFV1P49821 464 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 GEMP55040 296 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 POLR2GP62487 172 aaKnown RBP eCLIP12.39□□□□□ -0.43
HERC3-203ENST00000407637 TUSC1Q2TAM9 212 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 COL28A1Q2UY09 1125 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 DACT2Q5SW24 774 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 MZT2BQ6NZ67 158 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 CALHM3Q86XJ0 350 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 CCDC117Q8IWD4 279 aaPredicted RBP12.39□□□□□ -0.43
HERC3-203ENST00000407637 EMID1Q96A84 441 aaPredicted RBP12.39□□□□□ -0.43
HERC3-203ENST00000407637 ZC3HAV1LQ96H79 300 aaKnown RBP12.39□□□□□ -0.43
HERC3-203ENST00000407637 SLC9A7Q96T83 725 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 ZNF416Q9BWM5 594 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 CDCP1Q9H5V8 836 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 EIF2B4Q9UI10 523 aaKnown RBP12.39□□□□□ -0.43
HERC3-203ENST00000407637 SLC6A14Q9UN76 642 aa12.39□□□□□ -0.43
HERC3-203ENST00000407637 SAMD4AQ9UPU9 718 aaKnown RBP12.39□□□□□ -0.43
HERC3-203ENST00000407637 NOSIPQ9Y314 301 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms