RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 C9orf50Q5SZB4 431 aa13.58□□□□□ -0.24
SCAF4-202ENST00000399804 ADAMTS15Q8TE58 950 aa13.58□□□□□ -0.24
SCAF4-202ENST00000399804 APIPQ96GX9 242 aa13.58□□□□□ -0.24
SCAF4-202ENST00000399804 RBM4BQ9BQ04 359 aaKnown RBP13.58□□□□□ -0.24
SCAF4-202ENST00000399804 SLC35A5Q9BS91 424 aa13.58□□□□□ -0.24
SCAF4-202ENST00000399804 RBM4Q9BWF3 364 aaKnown RBP13.58□□□□□ -0.24
SCAF4-202ENST00000399804 FAM120CQ9NX05 1096 aaKnown RBP13.58□□□□□ -0.24
SCAF4-202ENST00000399804 DNAJB9Q9UBS3 223 aa13.58□□□□□ -0.24
SCAF4-202ENST00000399804 A0A0J9YVX5 310 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 NOBOXO60393 691 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 EEDO75530 441 aaKnown RBP13.57□□□□□ -0.24
SCAF4-202ENST00000399804 SBK3P0C264 359 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 HOXB6P17509 224 aaKnown RBP13.57□□□□□ -0.24
SCAF4-202ENST00000399804 NDUFS1P28331 727 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 SNAP47Q5SQN1 464 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 ERMP1Q7Z2K6 904 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 C10orf53Q8N6V4 93 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 TMIEQ8NEW7 156 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 C8orf4Q9NR00 106 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 ZCCHC3Q9NUD5 404 aaKnown RBP13.57□□□□□ -0.24
SCAF4-202ENST00000399804 DKK3Q9UBP4 350 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 ENOPH1Q9UHY7 261 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 NEU3Q9UQ49 428 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 IRAK3Q9Y616 596 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 LILRB3O75022 631 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 CREG1O75629 220 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 OPN1SWP03999 348 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 IGFBP5P24593 272 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 TRPC1P48995 793 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 ZNF763Q0D2J5 394 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 GNA13Q14344 377 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 TEAD4Q15561 434 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 EIF3MQ7L2H7 374 aaKnown RBP13.57□□□□□ -0.24
SCAF4-202ENST00000399804 ZNF605Q86T29 641 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 TMEM150AQ86TG1 271 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 ADIPOR2Q86V24 386 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 ZUFSPQ96AP4 578 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 VPS35Q96QK1 796 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 MRPS26Q9BYN8 205 aaKnown RBP13.57□□□□□ -0.24
SCAF4-202ENST00000399804 USE1Q9NZ43 259 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 KLHL42Q9P2K6 505 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 TESMINQ9Y4I5 508 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 KRT87PA6NCN2 255 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 NDUFS4O43181 175 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 CPOXP36551 454 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 INPP1P49441 399 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 CLDN8P56748 225 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 OR4D2P58180 307 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 CES4AQ5XG92 561 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 HACD2Q6Y1H2 254 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 RBM44Q6ZP01 1051 aaKnown RBP13.57□□□□□ -0.24
SCAF4-202ENST00000399804 NXPE3Q969Y0 559 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 ASB16Q96NS5 453 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 KLHL20Q9Y2M5 609 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 GPR45Q9Y5Y3 372 aa13.57□□□□□ -0.24
SCAF4-202ENST00000399804 MAP1BP46821 2468 aaKnown RBP13.56□□□□□ -0.24
SCAF4-202ENST00000399804 A6NHS1 94 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 GALK1P51570 392 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 HK3P52790 923 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 ROR2Q01974 943 aaKnown RBP13.56□□□□□ -0.24
SCAF4-202ENST00000399804 CDKL4Q5MAI5 379 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 PDSS2Q86YH6 399 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 TTLQ8NG68 377 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 OR5AR1Q8NGP9 310 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 SLC9A6Q92581 669 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 ARRDC3Q96B67 414 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 SLC22A18Q96BI1 424 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 ARMC7Q9H6L4 198 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 ETAA1Q9NY74 926 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 IKZF3Q9UKT9 509 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 PCDHB11Q9Y5F2 797 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 DGKBQ9Y6T7 804 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 PIPSLA2A3N6 862 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 PRKCQQ04759 706 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 EIF4EBP2Q13542 120 aaPredicted RBP13.56□□□□□ -0.24
SCAF4-202ENST00000399804 LMNTD1Q8N9Z9 388 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 OR7G3Q8NG95 312 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 B4GALNT2Q8NHY0 566 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 JPH3Q8WXH2 748 aaPredicted RBP13.56□□□□□ -0.24
SCAF4-202ENST00000399804 FOXJ1Q92949 421 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 MPP4Q96JB8 637 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 BRINP2Q9C0B6 783 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 RASSF1Q9NS23 344 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 SMIM31A0A1B0GVY4 71 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 TNFRSF11BO00300 401 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 FZD6O60353 706 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 BLKP51451 505 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 CATSPEREQ5SY80 951 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 IER5LQ5T953 404 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 BROXQ5VW32 411 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 DDHD1Q8NEL9 900 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 OR2M4Q96R27 311 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 NTMT1Q9BV86 223 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 P2RY12Q9H244 342 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 KCNH6Q9H252 994 aa13.56□□□□□ -0.24
SCAF4-202ENST00000399804 PRRT4C9JH25 899 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 RTCAO00442 366 aaKnown RBP13.55□□□□□ -0.24
SCAF4-202ENST00000399804 DIRAS1O95057 198 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 C6orf47O95873 294 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 GSTT1P30711 240 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms