RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 POLR1CO15160 346 aaPredicted RBP17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 GPR42O15529 346 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 B3GALT4O96024 378 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 C9P02748 559 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 ITGB1P05556 798 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 AZGP1P25311 298 aaKnown RBP17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 PTPN6P29350 595 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 NUDT1P36639 197 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 TUFMP49411 452 aaKnown RBP17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 MLLT6P55198 1093 aaPredicted RBP17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 ITGA1P56199 1179 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 MBTPS1Q14703 1052 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 CTSL3PQ5NE16 218 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 ANKRD46Q86W74 232 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 GPR151Q8TDV0 419 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 C1orf74Q96LT6 269 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 ATP13A2Q9NQ11 1180 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 RAD18Q9NS91 495 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 KCNN3Q9UGI6 736 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 CDKN2CP42773 168 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 GNPDA1P46926 289 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 ZNF140P52738 457 aaPredicted RBP17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 HYAL2Q12891 473 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 TARDBPQ13148 414 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 EFR3AQ14156 821 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 TAB1Q15750 504 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 ZNF79Q15937 498 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 C19orf48Q6RUI8 117 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 CRELD1Q96HD1 420 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 CEP295NLQ96MC4 621 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 OGDHLQ9ULD0 1010 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 TNPO3Q9Y5L0 923 aaKnown RBP17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 A0A1W2PQ72 361 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 SLC28A1O00337 649 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 PLK4O00444 970 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 INPPL1O15357 1258 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 TEX28O15482 410 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 RGS5O15539 181 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 OR1I1O60431 355 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 RPL9P32969 192 aaKnown RBP17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 MLLT3P42568 568 aaPredicted RBP17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 TSTQ16762 297 aaKnown RBP17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 CDONQ4KMG0 1287 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 DOK6Q6PKX4 331 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 ZNF367Q7RTV3 350 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 ADAMTSL2Q86TH1 951 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 ZNF598Q86UK7 904 aaKnown RBP17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 RNF130Q86XS8 419 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 HSH2DQ96JZ2 352 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 LRTM1Q9HBL6 345 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 AASDHPPTQ9NRN7 309 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 TAS2R16Q9NYV7 291 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 SPEF1Q9Y4P9 236 aa17.13■□□□□ 0.33
CDKN1B-201ENST00000228872 OR6C70A6NIJ9 312 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 ST3GAL4Q11206 333 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 UPP1Q16831 310 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 TTLL9Q3SXZ7 439 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 TIMM50Q3ZCQ8 353 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 TRIM60Q495X7 471 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 PAN2Q504Q3 1202 aaKnown RBP17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 USP39Q53GS9 565 aaKnown RBP17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 ATCAYQ86WG3 371 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 OR4K2Q8NGD2 314 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 COQ8BQ96D53 544 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 PRRG3Q9BZD7 231 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 SRRQ9GZT4 340 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 SLC22A4Q9H015 551 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 ABCC13Q9NSE7 274 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 ASIC5Q9NY37 505 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 TSR3Q9UJK0 312 aaKnown RBP17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 RPS6KA6Q9UK32 745 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 SNX7Q9UNH6 387 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 GFRA2O00451 464 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 ERP29P30040 261 aaKnown RBP17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 S100A3P33764 101 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 BNC1Q01954 994 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 FAPQ12884 760 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 ALFQ53S48 1182 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 SGO1Q5FBB7 561 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 SYCE2Q6PIF2 218 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 TMPRSS11AQ6ZMR5 421 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 LIX1LQ8IVB5 337 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 CARNMT1Q8N4J0 409 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 SPATA17Q96L03 361 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 OR5M11Q96RB7 305 aa17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 SARS2Q9NP81 518 aaKnown RBP17.12■□□□□ 0.33
CDKN1B-201ENST00000228872 GBF1Q92538 1859 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 A0A0B4J293 547 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 CCDC182A6NF36 153 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 POMCP01189 267 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 C1QCP02747 245 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 ALPPP05187 535 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 BCKDHAP12694 445 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 RHOQP17081 205 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 MYL9P24844 172 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 TIGD5Q53EQ6 642 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 RDH10Q8IZV5 341 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 CHCHD4Q8N4Q1 142 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 RNF31Q96EP0 1072 aa17.11■□□□□ 0.33
CDKN1B-201ENST00000228872 DEFB118Q96PH6 123 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms