RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 MRPS30Q9NP92 439 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 TMEM184CQ9NVA4 438 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 RIC8BQ9NVN3 520 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 ACTR10Q9NZ32 417 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 PCDHGA11Q9Y5H2 935 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 KLK4Q9Y5K2 254 aa14.18□□□□□ -0.14
SHKBP1-211ENST00000595945 LAMA1P25391 3075 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 ATP6AP2A0A1C7CYW4 349 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 OR5K3A6NET4 321 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 CCT8L1PA6NM43 557 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 ISM1B1AKI9 464 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 E9PBE3 544 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 H7BY64 318 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 SLC28A1O00337 649 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 TNFSF14O43557 240 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 PCDHGA12O60330 932 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 KLHL41O60662 606 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 CCDC22O60826 627 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 ATP6AP2O75787 350 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 HSD3B1P14060 373 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 POLR2CP19387 275 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 HSD3B2P26439 372 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 CMPK1P30085 196 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 NEK2P51955 445 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 CSTF3Q12996 717 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 IFT88Q13099 833 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 NR1D2Q14995 579 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 HIST2H2ACQ16777 129 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 SLC5A12Q1EHB4 618 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 SPDYAQ5MJ70 313 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 TMEM198Q66K66 360 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 HIST2H2AA3Q6FI13 130 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 TRPM8Q7Z2W7 1104 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 ZNF761Q86XN6 746 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 GATAD2AQ86YP4 633 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 KRT78Q8N1N4 520 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 CPSF7Q8N684 471 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 ZNF740Q8NDX6 193 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 SELENOMQ8WWX9 145 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 RSC1A1Q92681 617 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 UBE2E3Q969T4 207 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 REPS1Q96D71 796 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 PRAP1Q96NZ9 151 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 AIF1LQ9BQI0 150 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 DUSP23Q9BVJ7 150 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 SARGQ9BW04 601 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 ACPTQ9BZG2 426 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 RHBGQ9H310 441 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 SAR1AQ9NR31 198 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 GIMAP2Q9UG22 337 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 PPT2Q9UMR5 302 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 RNF215Q9Y6U7 377 aa14.17□□□□□ -0.14
SHKBP1-211ENST00000595945 LY6G6EA0A0G2JKS1 128 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 C2orf74A8MZ97 194 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 FOXE1O00358 373 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 EBAG9O00559 213 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 TRIM38O00635 465 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 LSM1O15116 133 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 NUDT21O43809 227 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 SPTBP11277 2137 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 LBPP18428 481 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 CXCR2P25025 360 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 GRIA3P42263 894 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 EPHA4P54764 986 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 MEF2AQ02078 507 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 SF1Q15637 639 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 SMU1Q2TAY7 513 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 SGO1Q5FBB7 561 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 C6orf136Q5SQH8 315 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 KIAA1614Q5VZ46 1190 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 NXNQ6DKJ4 435 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 ADNP2Q6IQ32 1131 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 ZCCHC8Q6NZY4 707 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 SPESP1Q6UW49 350 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 TMIGD1Q6UXZ0 262 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 VN1R5Q7Z5H4 357 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 PAQR7Q86WK9 346 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 OOSP2Q86WS3 158 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 FAM20CQ8IXL6 584 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 GBP7Q8N8V2 638 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 FAM181AQ8N9Y4 354 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 OR2I1PQ8NGU4 316 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 CCT6BQ92526 530 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 TUBGCP3Q96CW5 907 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 MTFMTQ96DP5 389 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 LRRC37BQ96QE4 947 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 HBEGFQ99075 208 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 DPH7Q9BTV6 452 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 SMOC1Q9H4F8 434 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 BRF2Q9HAW0 419 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 HRASLS2Q9NWW9 162 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 ANKMY1Q9P2S6 941 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 POMT2Q9UKY4 750 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 RAB23Q9ULC3 237 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 SNX7Q9UNH6 387 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 TRIM33Q9UPN9 1127 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 U3KQA8 63 aa14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 EP300Q09472 2414 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-211ENST00000595945 TRBC2A0A5B9 178 aa14.15□□□□□ -0.14
SHKBP1-211ENST00000595945 OR2A25A4D2G3 310 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms