RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 KIRREL2Q6UWL6 708 aa16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 NEK10Q6ZWH5 1172 aa16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 RAD51AP1Q96B01 352 aa16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 AGAP4Q96P64 663 aa16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 AARSD1Q9BTE6 412 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 RAB11FIP5Q9BXF6 653 aa16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 SEMA3GQ9NS98 782 aa16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 NSMCE4AQ9NXX6 385 aa16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 ZFATQ9P243 1243 aa16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 SLC39A10Q9ULF5 831 aa16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 CORO1CQ9ULV4 474 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 DHRS7Q9Y394 339 aa16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 PIKFYVEQ9Y2I7 2098 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 HIVEP3Q5T1R4 2406 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 VSTM2BA6NLU5 285 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 TARM1B6A8C7 271 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 RASGRF2O14827 1237 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 PRICKLE3O43900 615 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 AHSGP02765 367 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 GSTA2P09210 222 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 ENO3P13929 434 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 CLCN7P51798 805 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 GBX1Q14549 363 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 IRAK1BP1Q5VVH5 260 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 B3GNTL1Q67FW5 361 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 LRRC8EQ6NSJ5 796 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 ZNF549Q6P9A3 640 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 FIGLAQ6QHK4 219 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 CEP128Q6ZU80 1094 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 TICAM1Q8IUC6 712 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 ZUFSPQ96AP4 578 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 FAM136AQ96C01 138 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 VPS50Q96JG6 964 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 IL17FQ96PD4 163 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 SELENOSQ9BQE4 189 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 LHPPQ9H008 270 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 FAM114A2Q9NRY5 505 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 TAS2R13Q9NYV9 303 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 TRMT6Q9UJA5 497 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 KLK4Q9Y5K2 254 aa16.76■□□□□ 0.27
SHKBP1-203ENST00000594298 EIF3FO00303 357 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 E2F3O00716 465 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 SRPX2O60687 465 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 C1orf105O95561 183 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 MPC1LP0DKB6 136 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 MCM3P25205 808 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 RGS4P49798 205 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 SLC7A5Q01650 507 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 FASTKD3Q14CZ7 662 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 SF1Q15637 639 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 KLHL38Q2WGJ6 581 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 FAM214AQ32MH5 1076 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 TUBB8Q3ZCM7 444 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 TRMT10BQ6PF06 316 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 SLC26A11Q86WA9 606 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 C2orf73Q8N5S3 287 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 TTC29Q8NA56 475 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 OR11G2Q8NGC1 345 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 DNAJB14Q8TBM8 379 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 FBXO25Q8TCJ0 367 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 CDKL2Q92772 493 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 GPR21Q99679 349 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 WDR83Q9BRX9 315 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 FAM129AQ9BZQ8 928 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 PLAC1Q9HBJ0 212 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 MOCS1Q9NZB8 636 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 GALPQ9UBC7 116 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 CTSFQ9UBX1 484 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 PCM1Q15154 2024 aa16.75■□□□□ 0.27
SHKBP1-203ENST00000594298 ALOX12BO75342 701 aa16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 MATN4O95460 622 aa16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 CATP04040 527 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 EDN3P14138 238 aa16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 GRIA3P42263 894 aa16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 GUCY2DQ02846 1103 aa16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 ZNF169Q14929 603 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 TLR1Q15399 786 aa16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 ACSBG2Q5FVE4 666 aa16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 CYS1Q717R9 158 aa16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 TAX1BP1Q86VP1 789 aa16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 CCDC25Q86WR0 208 aa16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 SLC34A3Q8N130 599 aa16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 LMNTD1Q8N9Z9 388 aa16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 HMGCLL1Q8TB92 370 aa16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 GRHL3Q8TE85 626 aa16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 FAR1Q8WVX9 515 aa16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 TSPYL1Q9H0U9 437 aa16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 SOX17Q9H6I2 414 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 EPS8L2Q9H6S3 715 aa16.74■□□□□ 0.27
SHKBP1-203ENST00000594298 CTSVO60911 334 aa16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 F7P08709 466 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 GABRB3P28472 473 aa16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 HSD17B2P37059 387 aa16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 OR1D4P47884 311 aa16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 RBBP7Q16576 425 aa16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 FAM45BPQ6NSW5 357 aa16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 PRMT9Q6P2P2 845 aa16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 ZDHHC24Q6UX98 284 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms