RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ACSM2AQ08AH3 577 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 DDX39BQ13838 428 aaKnown RBP13.29□□□□□ -0.28
TPM1-215ENST00000558868 SAMD4BQ5PRF9 694 aaKnown RBP13.29□□□□□ -0.28
TPM1-215ENST00000558868 CATSPEREQ5SY80 951 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 ACSM2BQ68CK6 577 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 DUS1LQ6P1R4 473 aaKnown RBP13.29□□□□□ -0.28
TPM1-215ENST00000558868 SLC36A4Q6YBV0 504 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 ARPINQ7Z6K5 226 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 PHACTR4Q8IZ21 702 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 MINDY1Q8N5J2 469 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 ABHD11Q8NFV4 315 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 DNAJB8Q8NHS0 232 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 HUS1BQ8NHY5 278 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 ZFPM2Q8WW38 1151 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 SNX19Q92543 992 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 CXorf40BQ96DE9 158 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 KLHDC7BQ96G42 594 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 SPACA7Q96KW9 195 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 TPSD1Q9BZJ3 242 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 SLC52A3Q9NQ40 469 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 ADA2Q9NZK5 511 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 THEGQ9P2T0 379 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 TBC1D29Q9UFV1 150 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 TAC3Q9UHF0 121 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 PCDHB11Q9Y5F2 797 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 PCDHGA7Q9Y5G6 932 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 CFAP54Q96N23 3096 aa13.29□□□□□ -0.28
TPM1-215ENST00000558868 SPTY2D1-AS1A0A0U1RR47 76 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 OR5K4A6NMS3 321 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 METTL12A8MUP2 240 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 FKBP6O75344 327 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 PDE5AO76074 875 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 CDH1P12830 882 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 HNRNPH1P31943 449 aaKnown RBP13.28□□□□□ -0.28
TPM1-215ENST00000558868 ASMTP46597 345 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 NFYCQ13952 458 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 DPY19L1Q2PZI1 675 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 PIGGQ5H8A4 983 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 TPRG1LQ5T0D9 272 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 NOXRED1Q6NXP6 359 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 C8orf82Q6P1X6 216 aaPredicted RBP13.28□□□□□ -0.28
TPM1-215ENST00000558868 TMIGD1Q6UXZ0 262 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 RIPOR1Q6ZS17 1223 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 IQCHQ86VS3 1027 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 TBC1D19Q8N5T2 526 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 DPP10Q8N608 796 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 OR52E1Q8NGJ3 308 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 GPBAR1Q8TDU6 330 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 APIPQ96GX9 242 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 TEX37Q96LM6 180 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 APOLD1Q96LR9 279 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 MTERF1Q99551 399 aaKnown RBP13.28□□□□□ -0.28
TPM1-215ENST00000558868 TMEM168Q9H0V1 697 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 RNPEPL1Q9HAU8 725 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 C11orf16Q9NQ32 467 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 AASDHPPTQ9NRN7 309 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 GPR27Q9NS67 375 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 C2orf42Q9NWW7 574 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 SIRT5Q9NXA8 310 aa13.28□□□□□ -0.28
TPM1-215ENST00000558868 OR52A4PA6NMU1 304 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 MAGEB17A8MXT2 336 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 ENTPD5O75356 428 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 STAMBPO95630 424 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 F3P13726 295 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 CTSEP14091 401 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 PRPS1L1P21108 318 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 PTX3P26022 381 aaPredicted RBP13.27□□□□□ -0.29
TPM1-215ENST00000558868 IL12AP29459 219 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 ZFP36L2P47974 494 aaKnown RBP13.27□□□□□ -0.29
TPM1-215ENST00000558868 CXCL12P48061 93 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 RPS13P62277 151 aaKnown RBP13.27□□□□□ -0.29
TPM1-215ENST00000558868 REEP5Q00765 189 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 PRDX1Q06830 199 aaKnown RBP13.27□□□□□ -0.29
TPM1-215ENST00000558868 TLR1Q15399 786 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 CCDC6Q16204 474 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 ZNF423Q2M1K9 1284 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 TIGD2Q4W5G0 525 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 ICE2Q659A1 982 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 AAGABQ6PD74 315 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 SLC30A9Q6PML9 568 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 LAYNQ6UX15 382 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 MSANTD1Q6ZTZ1 278 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 RETREG3Q86VR2 466 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 FAM129CQ86XR2 697 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 HPS6Q86YV9 775 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 C2orf73Q8N5S3 287 aaPredicted RBP13.27□□□□□ -0.29
TPM1-215ENST00000558868 MFSD2AQ8NA29 543 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 TTLQ8NG68 377 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 OR4K1Q8NGD4 311 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 CHTF18Q8WVB6 975 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 WDR60Q8WVS4 1066 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 RLN3Q8WXF3 142 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 SLC22A18Q96BI1 424 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 TESCQ96BS2 214 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 LRRC58Q96CX6 371 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 GPATCH1Q9BRR8 931 aaKnown RBP13.27□□□□□ -0.29
TPM1-215ENST00000558868 RHBGQ9H310 441 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 ACTL8Q9H568 366 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 CLMPQ9H6B4 373 aa13.27□□□□□ -0.29
TPM1-215ENST00000558868 RMND5AQ9H871 391 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms