RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 PARP8Q8N3A8 854 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 ABHD11Q8NFV4 315 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 SNX19Q92543 992 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 EFHD2Q96C19 240 aaPredicted RBP14.31□□□□□ -0.12
DDX55-209ENST00000542286 CSF3RQ99062 836 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 REXO4Q9GZR2 422 aaKnown RBP14.31□□□□□ -0.12
DDX55-209ENST00000542286 RDH14Q9HBH5 336 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 ZNF106Q9H2Y7 1883 aaKnown RBP14.31□□□□□ -0.12
DDX55-209ENST00000542286 hCG_2039718K7EN88 272 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 HS6ST1O60243 411 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 DEAF1O75398 565 aaPredicted RBP14.31□□□□□ -0.12
DDX55-209ENST00000542286 IL6P05231 212 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 RHOP08100 348 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 SLC6A12P48065 614 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 MEF2AQ02078 507 aaPredicted RBP14.31□□□□□ -0.12
DDX55-209ENST00000542286 COL9A2Q14055 689 aaPredicted RBP14.31□□□□□ -0.12
DDX55-209ENST00000542286 CLPPQ16740 277 aaPredicted RBP14.31□□□□□ -0.12
DDX55-209ENST00000542286 LYPLAL1Q5VWZ2 237 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 MICU2Q8IYU8 434 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 ELMOD1Q8N336 334 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 RASGEF1AQ8N9B8 481 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 SH3YL1Q96HL8 342 aaPredicted RBP14.31□□□□□ -0.12
DDX55-209ENST00000542286 ZNF641Q96N77 438 aaPredicted RBP14.31□□□□□ -0.12
DDX55-209ENST00000542286 RAD21L1Q9H4I0 556 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 EHD1Q9H4M9 534 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 SIAEQ9HAT2 523 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 TDP1Q9NUW8 608 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 ZNF639Q9UID6 485 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 POU2F3Q9UKI9 436 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 SH2B3Q9UQQ2 575 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 PRKAB1Q9Y478 270 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 PCDHGA8Q9Y5G5 932 aa14.31□□□□□ -0.12
DDX55-209ENST00000542286 TRBV5-3A0A0A0MS03 114 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 CLDN25C9JDP6 229 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 CPNE6O95741 557 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 THRBP10828 461 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 TIMP2P16035 220 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 HPCAL1P37235 193 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 IRF8Q02556 426 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 IER5LQ5T953 404 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 FRG2Q64ET8 278 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 NOXRED1Q6NXP6 359 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 ZNF621Q6ZSS3 439 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 GRASPQ7Z6J2 395 aaPredicted RBP14.3□□□□□ -0.12
DDX55-209ENST00000542286 ZDHHC13Q8IUH4 622 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 SNX29P2Q8IUI4 249 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 RAB2BQ8WUD1 216 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 FRG2BQ96QU4 278 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 OR4K3Q96R72 315 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 MBOAT4Q96T53 435 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 PSD2Q9BQI7 771 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 CPPED1Q9BRF8 314 aaPredicted RBP14.3□□□□□ -0.12
DDX55-209ENST00000542286 ING2Q9H160 280 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 SPHK2Q9NRA0 654 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 ABCG2Q9UNQ0 655 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 NOX1Q9Y5S8 564 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 PTPRSQ13332 1948 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 IGLV3-16A0A075B6K0 115 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 RFXANKO14593 260 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 SEC14L2O76054 403 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 MSH3P20585 1137 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 FSHRP23945 695 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 RECQLP46063 649 aaPredicted RBP14.3□□□□□ -0.12
DDX55-209ENST00000542286 ALDH3A2P51648 485 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 GTF2H3Q13889 308 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 SF3B4Q15427 424 aaKnown RBP eCLIP14.3□□□□□ -0.121e-13■■■■■ 68.7
DDX55-209ENST00000542286 CTU2Q2VPK5 515 aaKnown RBP14.3□□□□□ -0.12
DDX55-209ENST00000542286 CCNYL2Q5T2Q4 361 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 ZCCHC8Q6NZY4 707 aaKnown RBP14.3□□□□□ -0.12
DDX55-209ENST00000542286 USP51Q70EK9 711 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 MAL2Q969L2 176 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 TOX2Q96NM4 488 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 MUC13Q9H3R2 512 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 GPN2Q9H9Y4 310 aaPredicted RBP14.3□□□□□ -0.12
DDX55-209ENST00000542286 ERVW-1Q9UQF0 538 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 DGKBQ9Y6T7 804 aa14.3□□□□□ -0.12
DDX55-209ENST00000542286 KPNA3O00505 521 aaPredicted RBP14.29□□□□□ -0.12
DDX55-209ENST00000542286 JRKO75564 520 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 SLC16A8O95907 504 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 NPPAP01160 153 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 NTRK1P04629 796 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 ADH1AP07327 375 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 ABCB1P08183 1280 aaPredicted RBP14.29□□□□□ -0.12
DDX55-209ENST00000542286 DOC2AQ14183 400 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 ZNF846Q147U1 533 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 INAQ16352 499 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 GOLM1Q8NBJ4 401 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 CTRCQ99895 268 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 TMEM121BQ9BXQ6 578 aaPredicted RBP14.29□□□□□ -0.12
DDX55-209ENST00000542286 NDEL1Q9GZM8 345 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 DNAJC11Q9NVH1 559 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 PABPN1LA6NDY0 278 aaKnown RBP14.29□□□□□ -0.12
DDX55-209ENST00000542286 A8MU76 341 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 WASH3PC4AMC7 463 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 FAM47E-STBD1D6RA91 191 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 NUAK1O60285 661 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 MYO1DO94832 1006 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 LAMP1P11279 417 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 AMD1P17707 334 aa14.29□□□□□ -0.12
DDX55-209ENST00000542286 RAD23AP54725 363 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms