RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 HS3ST3B1Q9Y662 390 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 COMMD10Q9Y6G5 202 aa10.12□□□□□ -0.79
NELFE-213ENST00000494956 A0A0A6YYC8 382 aaPredicted RBP10.11□□□□□ -0.79
NELFE-213ENST00000494956 FEZF1A0PJY2 475 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 VSTM2BA6NLU5 285 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 TTLL8A6PVC2 850 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 I3L1I5 382 aaPredicted RBP10.11□□□□□ -0.79
NELFE-213ENST00000494956 AGPSO00116 658 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 PEX12O00623 359 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 FOXS1O43638 330 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 TTC4O95801 387 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 ONECUT2O95948 504 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 SAT1P21673 171 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 FDXRP22570 491 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 PAFAH1B1P43034 410 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 EFNA3P52797 238 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 RRADP55042 308 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 ARL4CP56559 192 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 MAT1AQ00266 395 aaKnown RBP10.11□□□□□ -0.79
NELFE-213ENST00000494956 MEF2AQ02078 507 aaPredicted RBP10.11□□□□□ -0.79
NELFE-213ENST00000494956 KLC1Q07866 573 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 Q0VFX4 171 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 NAE1Q13564 534 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 ZNF460Q14592 562 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 HIF1AQ16665 826 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 FAM214AQ32MH5 1076 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 STEAP4Q687X5 459 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 FAAH2Q6GMR7 532 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 JMJD6Q6NYC1 403 aaPredicted RBP10.11□□□□□ -0.79
NELFE-213ENST00000494956 KIRREL2Q6UWL6 708 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 PRSS41Q7RTY9 318 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 PDIK1LQ8N165 341 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 GALNT16Q8N428 558 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 ARHGEF39Q8N4T4 335 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 CSNK1A1LQ8N752 337 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 STT3BQ8TCJ2 826 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 FKBP10Q96AY3 582 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 PYCR2Q96C36 320 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 SNF8Q96H20 258 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 CCDC138Q96M89 665 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 SMAD5Q99717 465 aaKnown RBP10.11□□□□□ -0.79
NELFE-213ENST00000494956 YIPF2Q9BWQ6 316 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 ZNF552Q9H707 407 aaPredicted RBP10.11□□□□□ -0.79
NELFE-213ENST00000494956 SMYD2Q9NRG4 433 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 ENAMQ9NRM1 1142 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 TAS2R13Q9NYV9 303 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 FBXL4Q9UKA2 621 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 ZNF451Q9Y4E5 1061 aa10.11□□□□□ -0.79
NELFE-213ENST00000494956 CCDC188H7C350 402 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 RAD51CO43502 376 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 LCMT2O60294 686 aaKnown RBP10.1□□□□□ -0.79
NELFE-213ENST00000494956 JRKO75564 520 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 SORBS2O94875 1100 aaKnown RBP10.1□□□□□ -0.79
NELFE-213ENST00000494956 GUCA1CO95843 209 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 ALBP02768 609 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 ZGLP1P0C6A0 271 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 FBLP22087 321 aaKnown RBP10.1□□□□□ -0.79
NELFE-213ENST00000494956 MMP11P24347 488 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 ITGA3P26006 1051 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 TRADDQ15628 312 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 RBBP7Q16576 425 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 MUM1Q2TAK8 710 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 PLEKHN1Q494U1 663 aaPredicted RBP10.1□□□□□ -0.79
NELFE-213ENST00000494956 YOD1Q5VVQ6 348 aaPredicted RBP10.1□□□□□ -0.79
NELFE-213ENST00000494956 PRAMEF13Q5VWM6 474 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 SLC6A19Q695T7 634 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 UGT3A1Q6NUS8 523 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 AGTRAPQ6RW13 159 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 SYDE1Q6ZW31 735 aaPredicted RBP10.1□□□□□ -0.79
NELFE-213ENST00000494956 VN1R4Q7Z5H5 301 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 MYO1HQ8N1T3 1032 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 AMER3Q8N944 861 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 CLEC1AQ8NC01 280 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 CPT1CQ8TCG5 803 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 MCOLN3Q8TDD5 553 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 C19orf60Q96EN9 201 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 MMABQ96EY8 250 aaPredicted RBP10.1□□□□□ -0.79
NELFE-213ENST00000494956 FER1L6-AS2Q96M78 137 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 CRB3Q9BUF7 120 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 UNKQ9C0B0 810 aaKnown RBP10.1□□□□□ -0.79
NELFE-213ENST00000494956 SLC26A1Q9H2B4 701 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 WDR54Q9H977 334 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 PARVBQ9HBI1 364 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 CCDC177Q9NQR7 707 aaPredicted RBP10.1□□□□□ -0.79
NELFE-213ENST00000494956 UTP6Q9NYH9 597 aaKnown RBP10.1□□□□□ -0.79
NELFE-213ENST00000494956 ANKMY1Q9P2S6 941 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 TRPC4Q9UBN4 977 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 VWA7Q9Y334 891 aa10.1□□□□□ -0.79
NELFE-213ENST00000494956 OR2W5A6NFC9 320 aa10.09□□□□□ -0.79
NELFE-213ENST00000494956 ZNF839A8K0R7 811 aa10.09□□□□□ -0.79
NELFE-213ENST00000494956 E7ESA3 106 aa10.09□□□□□ -0.79
NELFE-213ENST00000494956 EIF3FO00303 357 aaPredicted RBP10.09□□□□□ -0.79
NELFE-213ENST00000494956 DPM1O60762 260 aa10.09□□□□□ -0.79
NELFE-213ENST00000494956 CCNDBP1O95273 360 aa10.09□□□□□ -0.79
NELFE-213ENST00000494956 C8GP07360 202 aa10.09□□□□□ -0.79
NELFE-213ENST00000494956 CELA2AP08217 269 aa10.09□□□□□ -0.79
NELFE-213ENST00000494956 PIM1P11309 404 aaPredicted RBP10.09□□□□□ -0.79
NELFE-213ENST00000494956 CDH1P12830 882 aa10.09□□□□□ -0.79
NELFE-213ENST00000494956 EZRP15311 586 aaKnown RBP10.09□□□□□ -0.79
NELFE-213ENST00000494956 GNLYP22749 145 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms