RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 PRKAA1Q13131 559 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 ZRSR2Q15696 482 aaKnown RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 ZIC1Q15915 447 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 XKR6Q5GH73 641 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 ICE2Q659A1 982 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 MRPL14Q6P1L8 145 aaKnown RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 FIGLAQ6QHK4 219 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 WDR74Q6RFH5 385 aaPredicted RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 EPGNQ6UW88 154 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 PRR23CQ6ZRP0 262 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 FAM47EQ6ZV65 393 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 GPRIN3Q6ZVF9 776 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 TMPRSS9Q7Z410 1059 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 MAVSQ7Z434 540 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 CUZD1Q86UP6 607 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 C17orf64Q86WR6 236 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 LAS2Q8IYD9 372 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 DNAJC22Q8N4W6 341 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 DCBLD1Q8N8Z6 715 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 Q8N9G6 341 aaPredicted RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 SNX31Q8N9S9 440 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 ANKRD53Q8N9V6 530 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 AVL9Q8NBF6 648 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 OR2L3Q8NG85 312 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 OR7G3Q8NG95 312 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 OR6C4Q8NGE1 309 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 RFWD2Q8NHY2 731 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 PPP1R14CQ8TAE6 165 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 BAHD1Q8TBE0 780 aaPredicted RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 WDR20Q8TBZ3 569 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 PIWIL2Q8TC59 973 aaKnown RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 METTL6Q8TCB7 284 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 SLC5A11Q8WWX8 675 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 SREK1Q8WXA9 508 aaKnown RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 NCSTNQ92542 709 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 RSC1A1Q92681 617 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 ATP6V1E2Q96A05 226 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 SLC22A18Q96BI1 424 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 GRAMD1AQ96CP6 724 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 MTFMTQ96DP5 389 aaKnown RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 TM4SF19Q96DZ7 209 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 CHMP6Q96FZ7 201 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 MED8Q96G25 268 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 C3orf30Q96M34 536 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 TRAPPC9Q96Q05 1148 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 KCNA7Q96RP8 456 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 SLC38A3Q99624 504 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 ELAC2Q9BQ52 826 aaKnown RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 PLCD4Q9BRC7 762 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 DPH7Q9BTV6 452 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 RAB11FIP5Q9BXF6 653 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 SPNS1Q9H2V7 528 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 RHBGQ9H310 441 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 EHD1Q9H4M9 534 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 SYNPO2LQ9H987 977 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 EML4Q9HC35 981 aaKnown RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 FAM60AQ9NP50 221 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 SLC6A20Q9NP91 592 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 CCDC177Q9NQR7 707 aaPredicted RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 FARSBQ9NSD9 589 aaKnown RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 ABCF3Q9NUQ8 709 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 EVA1BQ9NVM1 165 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 CUEDC1Q9NWM3 386 aaPredicted RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 GEMIN8Q9NWZ8 242 aaKnown RBP5.72□□□□□ -1.49
USP39-213ENST00000467885 PSD3Q9NYI0 1048 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 NCDNQ9UBB6 729 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 TAC3Q9UHF0 121 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 RAPGEFL1Q9UHV5 662 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 POMT2Q9UKY4 750 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 KLHL20Q9Y2M5 609 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 TSC22D4Q9Y3Q8 395 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 ANGPTL3Q9Y5C1 460 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 KMT2EQ8IZD2 1858 aa5.72□□□□□ -1.49
USP39-213ENST00000467885 IGHV5-51A0A0C4DH38 117 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 OR2A25A4D2G3 310 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 PABPN1LA6NDY0 278 aaKnown RBP5.71□□□□□ -1.5
USP39-213ENST00000467885 SLC9B1P1A6NJY1 282 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 C2orf74A8MZ97 194 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 SLCO1B7G3V0H7 640 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 H0YIV9 168 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 MANBAO00462 879 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 NTN3O00634 580 aaPredicted RBP5.71□□□□□ -1.5
USP39-213ENST00000467885 CLGNO14967 610 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 HDAC3O15379 428 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 FLRT2O43155 660 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 HCRTR1O43613 425 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 NRP2O60462 931 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 SNX3O60493 162 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 CTSVO60911 334 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 KLHL18O94889 574 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 FKBP9O95302 570 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 HSPA4LO95757 839 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 JUNP05412 331 aaKnown RBP5.71□□□□□ -1.5
USP39-213ENST00000467885 CCNYL3P0C7X3 344 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 LINC00032P0C843 101 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 VSIG8P0DPA2 414 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 KITP10721 976 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 UROSP10746 265 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 CDH1P12830 882 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 JUPP14923 745 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms