RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ROPN1BQ9BZX4 212 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 KLHL4Q9C0H6 718 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 DRC3Q9H069 523 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 DNAJC18Q9H819 358 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 ROPN1Q9HAT0 212 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 QPCTLQ9NXS2 382 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 C1RLQ9NZP8 487 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 NFKBIL1Q9UBC1 381 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 DBF4Q9UBU7 674 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 PPIEQ9UNP9 301 aaKnown RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 MYH11P35749 1972 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 C1orf167Q5SNV9 1468 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 RBBP6Q7Z6E9 1792 aaKnown RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 LRP5O75197 1615 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 DIP2BQ9P265 1576 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 LOC102723996A0A087X1L8 192 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 hCG_1809904A0A1W2PP81 198 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 A0A1W2PPE2 198 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 A0A1W2PR64 198 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 BTNL10A8MVZ5 291 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 FAM90A26D6RGX4 464 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 INO80B-WBP1J3KQ70 363 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 RASGRF2O14827 1237 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 RSL1D1O76021 490 aaKnown RBP4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 KCNK5O95279 499 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 RPN1P04843 607 aaKnown RBP4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 IGKV2-30P06310 120 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 PABPC4LP0CB38 370 aaKnown RBP4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 FDPSP14324 419 aaKnown RBP4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 KRT2P35908 639 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 TRPC1P48995 793 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 LIG4P49917 911 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 ARSEP51690 589 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 ADARP55265 1226 aaKnown RBP4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 IL9RQ01113 521 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 SLC34A1Q06495 639 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 AP1B1Q10567 949 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 CALCOCO2Q13137 446 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 RASA2Q15283 850 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 RCN1Q15293 331 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 DLG2Q15700 870 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 CALCRLQ16602 461 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 TRMT5Q32P41 509 aaKnown RBP4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 ZCWPW2Q504Y3 356 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 C18orf63Q68DL7 685 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 AWAT2Q6E213 333 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 GALNT17Q6IS24 598 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 PDXDC1Q6P996 788 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 C9orf47Q6ZRZ4 202 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 STOX1Q6ZVD7 989 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 NLRP9Q7RTR0 991 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 GLCCI1Q86VQ1 547 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 KLHL7Q8IXQ5 586 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 NUP93Q8N1F7 819 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 PGBD5Q8N414 524 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 RASGEF1CQ8N431 466 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 GUF1Q8N442 669 aaKnown RBP4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 KIF2BQ8N4N8 673 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 CSGALNACT2Q8N6G5 542 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 POGLUT1Q8NBL1 392 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 THAP6Q8TBB0 222 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 TBC1D16Q8TBP0 767 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 PTPMT1Q8WUK0 201 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 SYN2Q92777 582 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 ATP6V0A1Q93050 837 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 MIB2Q96AX9 1013 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 TMCO6Q96DC7 493 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 PHF21BQ96EK2 531 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 PAGE5Q96GU1 130 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 CNOT6LQ96LI5 555 aaKnown RBP4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 MAGEB18Q96M61 343 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 TGS1Q96RS0 853 aaKnown RBP4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 MTERF1Q99551 399 aaKnown RBP4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 CHP1Q99653 195 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 CMKLR1Q99788 373 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 TSG101Q99816 390 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 PRMT1Q99873 361 aaKnown RBP4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 SYT15Q9BQS2 421 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 TUBGCP2Q9BSJ2 902 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 TMEM109Q9BVC6 243 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 SEZ6LQ9BYH1 1024 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 DENND2DQ9H6A0 471 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 SAR1AQ9NR31 198 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 EURLQ9NYK6 297 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 SENP1Q9P0U3 644 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 STX18Q9P2W9 335 aaKnown RBP4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 WNT16Q9UBV4 365 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 LNPEPQ9UIQ6 1025 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 FBXL2Q9UKC9 423 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 CHMP2BQ9UQN3 213 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 HBS1LQ9Y450 684 aaKnown RBP4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 FADS3Q9Y5Q0 445 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 UBR1Q8IWV7 1749 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 LOXHD1Q8IVV2 1947 aa4.29□□□□□ -1.72
HMGB1P16-201ENST00000447155 PCDH11XQ9BZA7 1347 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 A0A0J9YVX5 310 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 CCDC160A6NGH7 325 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 A6NL46 340 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 TCP11X1B4DZS4 312 aa4.28□□□□□ -1.72
HMGB1P16-201ENST00000447155 OVOL3O00110 214 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms