RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 HDDC2Q7Z4H3 204 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 CLEC14AQ86T13 490 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 PPTC7Q8NI37 304 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 SLC35B4Q969S0 331 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 SLC30A2Q9BRI3 323 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 SPIN1Q9Y657 262 aaPredicted RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 KDM4BO94953 1096 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 S1PR4O95977 384 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 UMPSP11172 480 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 NAT1P18440 290 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 GPC1P35052 558 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 MVKQ03426 396 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 PAFAH1B3Q15102 231 aaKnown RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 HKDC1Q2TB90 917 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 C22orf42Q6IC83 251 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 ZNF613Q6PF04 617 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 USP30Q70CQ3 517 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 DNAJB7Q7Z6W7 309 aaPredicted RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 DCP2Q8IU60 420 aaKnown RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 BEST4Q8NFU0 473 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 ZUFSPQ96AP4 578 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 C11orf24Q96F05 449 aaPredicted RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 BCL7BQ9BQE9 202 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 ASPNQ9BXN1 380 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 MCOLN1Q9GZU1 580 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 CLEC4MQ9H2X3 399 aaPredicted RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 MCUBQ9NWR8 336 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 MRPL15Q9P015 296 aaKnown RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 CD300AQ9UGN4 299 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 FCF1Q9Y324 198 aaKnown RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 ISM1B1AKI9 464 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 TULP3O75386 442 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 RPP40O75818 363 aaKnown RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 OTCP00480 354 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 CSTF1Q05048 431 aaKnown RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 INCA1Q0VD86 236 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 GALNT2Q10471 571 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 ZNF177Q13360 481 aaPredicted RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 CAMK2GQ13555 558 aaPredicted RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 TARBP2Q15633 366 aaKnown RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 TAZQ16635 292 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 WSCD2Q2TBF2 565 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 LRIT3Q3SXY7 679 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 TIGD5Q53EQ6 642 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 TMEM126BQ8IUX1 230 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 LGI4Q8N135 537 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 VPS37AQ8NEZ2 397 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 OR6Q1Q8NGQ2 317 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 BTN2A2Q8WVV5 523 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 TMEM40Q8WWA1 233 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 JPH3Q8WXH2 748 aaPredicted RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 FEVQ99581 238 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 TMED9Q9BVK6 235 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 MROQ9BYG7 248 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 ZYG11BQ9C0D3 744 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 GPRC5BQ9NZH0 403 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 SPO11Q9Y5K1 396 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 RP1L1Q8IWN7 2480 aaPredicted RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 FAM172BPA6NC97 362 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 CLIC1O00299 241 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 ADAMDEC1O15204 470 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 AKR7A2O43488 359 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 UGT2B11O75310 529 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 NUDT7P0C024 238 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 ALPPL2P10696 532 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 KCNQ1P51787 676 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 EEFSECP57772 596 aaKnown RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 KRR1Q13601 381 aaKnown RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 POU4F3Q15319 338 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 XKR6Q5GH73 641 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 IER5LQ5T953 404 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 NADSYN1Q6IA69 706 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 CCDC28AQ8IWP9 274 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 MINDY1Q8N5J2 469 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 MFSD2AQ8NA29 543 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 PROKR1Q8TCW9 393 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 BPIFB1Q8TDL5 484 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 RIT1Q92963 219 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 YIPF4Q9BSR8 244 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 TMEM121BQ9BXQ6 578 aaPredicted RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 FAM126AQ9BYI3 521 aaPredicted RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 TMEM39AQ9NV64 488 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 KIAA1522Q9P206 1035 aaPredicted RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 UBA2Q9UBT2 640 aaPredicted RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 HS3ST4Q9Y661 456 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 ADAMTS4O75173 837 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 TRBC1P01850 177 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 PSMA1P25786 263 aaKnown RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 CDC42P60953 191 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 RPS14P62263 151 aaKnown RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 FGFBP1Q14512 234 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 MBTPS1Q14703 1052 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 VEPH1Q14D04 833 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 GOLGA7Q7Z5G4 137 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 SPATA19Q7Z5L4 167 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 LYSMD2Q8IV50 215 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 PIANPQ8IYJ0 282 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 ZNF366Q8N895 744 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 PPP3R2Q96LZ3 170 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms