RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ICKQ9UPZ9 632 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 BTRCQ9Y297 605 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 A0A1B0GVT2 93 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 E7EQ34 232 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 PIP5K1BO14986 540 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 PKLRP30613 574 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 HALP42357 657 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 PIK3CGP48736 1102 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 CCNIQ14094 377 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 CAPN13Q6MZZ7 669 aaPredicted RBP14.18□□□□□ -0.14
CXCL12-201ENST00000343575 ZFP1Q6P2D0 407 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 ZBTB44Q8NCP5 570 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 STON2Q8WXE9 905 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 JPH3Q8WXH2 748 aaPredicted RBP14.18□□□□□ -0.14
CXCL12-201ENST00000343575 ZC3H10Q96K80 434 aaKnown RBP14.18□□□□□ -0.14
CXCL12-201ENST00000343575 KIR3DX1Q9H7L2 352 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 FARSBQ9NSD9 589 aaKnown RBP14.18□□□□□ -0.14
CXCL12-201ENST00000343575 POLG2Q9UHN1 485 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 DMDP11532 3685 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 CABIN1Q9Y6J0 2220 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 ATP6AP2A0A1C7CYW4 349 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 ATP6AP2O75787 350 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 TNFAIP8O95379 198 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 CLDN9O95484 217 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 SP9P0CG40 484 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 CTSEP14091 401 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 XRCC1P18887 633 aaPredicted RBP14.17□□□□□ -0.14
CXCL12-201ENST00000343575 FOLH1Q04609 750 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 CHIT1Q13231 466 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 TRIP10Q15642 601 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 GGTA1PQ4G0N0 100 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 SCIMPQ6UWF3 145 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 SLCO4C1Q6ZQN7 724 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 FBXW8Q8N3Y1 598 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 SFRP1Q8N474 314 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 OR2T11Q8NH01 316 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 HMGCLL1Q8TB92 370 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 METTL6Q8TCB7 284 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 SERPINI1Q99574 410 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 NUSAP1Q9BXS6 441 aaKnown RBP14.17□□□□□ -0.14
CXCL12-201ENST00000343575 TWSG1Q9GZX9 223 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 ZNF696Q9H7X3 374 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 TCF7L2Q9NQB0 619 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 SPATA7Q9P0W8 599 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 TRPS1Q9UHF7 1281 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 PRPF19Q9UMS4 504 aaKnown RBP14.17□□□□□ -0.14
CXCL12-201ENST00000343575 DTNAQ9Y4J8 743 aa14.17□□□□□ -0.14
CXCL12-201ENST00000343575 C15orf38-AP3S2A0A0A6YYH1 394 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 TRPC5OSA6NMA1 111 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 FFAR3O14843 346 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 GPR42O15529 346 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 PRICKLE3O43900 615 aaPredicted RBP14.16□□□□□ -0.14
CXCL12-201ENST00000343575 CLPTM1O96005 669 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 LINC00032P0C843 101 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 HGFP14210 728 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 PSMB5P28074 263 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 CTSKP43235 329 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 RAB28P51157 221 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 AQP4P55087 323 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 UBE2IP63279 158 aaKnown RBP14.16□□□□□ -0.14
CXCL12-201ENST00000343575 CYLC2Q14093 348 aaPredicted RBP14.16□□□□□ -0.14
CXCL12-201ENST00000343575 DOC2AQ14183 400 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 ABRAXAS2Q15018 415 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 KIF19Q2TAC6 998 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 XKR7Q5GH72 579 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 CATSPEREQ5SY80 951 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 METTL21CQ5VZV1 264 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 TMEM198Q66K66 360 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 Q6ZSR9 355 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 LARP4Q71RC2 724 aaKnown RBP eCLIP14.16□□□□□ -0.14
CXCL12-201ENST00000343575 ARPINQ7Z6K5 226 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 SLC37A2Q8TED4 501 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 PYDC1Q8WXC3 89 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 C19orf60Q96EN9 201 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 MPP4Q96JB8 637 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 HBEGFQ99075 208 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 ACTR8Q9H981 624 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 CCDC177Q9NQR7 707 aaPredicted RBP14.16□□□□□ -0.14
CXCL12-201ENST00000343575 UCKL1Q9NWZ5 548 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 GALNT8Q9NY28 637 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 GIMAP2Q9UG22 337 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 CCL27Q9Y4X3 112 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 SNX11Q9Y5W9 270 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 HEBP2Q9Y5Z4 205 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 TMEM131Q92545 1883 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 A0A1B0GTW7 788 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 E9PBE3 544 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 YY2O15391 372 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 KLHL41O60662 606 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 VARSP26640 1264 aaKnown RBP14.16□□□□□ -0.14
CXCL12-201ENST00000343575 PEBP1P30086 187 aaKnown RBP14.16□□□□□ -0.14
CXCL12-201ENST00000343575 HSD17B2P37059 387 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 ARL1P40616 181 aaPredicted RBP14.16□□□□□ -0.14
CXCL12-201ENST00000343575 CASP2P42575 452 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 TSTA3Q13630 321 aaPredicted RBP14.16□□□□□ -0.14
CXCL12-201ENST00000343575 UBAP2LQ14157 1087 aaKnown RBP14.16□□□□□ -0.14
CXCL12-201ENST00000343575 MYBPC3Q14896 1274 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 SHBQ15464 509 aa14.16□□□□□ -0.14
CXCL12-201ENST00000343575 CPSF6Q16630 551 aaKnown RBP eCLIP14.16□□□□□ -0.14
CXCL12-201ENST00000343575 ZNF528Q3MIS6 628 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms