RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ATP1A4Q13733 1029 aa16■□□□□ 0.15
USB1-211ENST00000565662 DCAF10Q5QP82 559 aa16■□□□□ 0.15
USB1-211ENST00000565662 LCN10Q6JVE6 187 aa16■□□□□ 0.15
USB1-211ENST00000565662 ZNF549Q6P9A3 640 aa16■□□□□ 0.15
USB1-211ENST00000565662 KLHL7Q8IXQ5 586 aa16■□□□□ 0.15
USB1-211ENST00000565662 CPNE9Q8IYJ1 553 aa16■□□□□ 0.15
USB1-211ENST00000565662 EFCAB3Q8N7B9 438 aa16■□□□□ 0.15
USB1-211ENST00000565662 GIMAP7Q8NHV1 300 aa16■□□□□ 0.15
USB1-211ENST00000565662 CDKL2Q92772 493 aa16■□□□□ 0.15
USB1-211ENST00000565662 RNF31Q96EP0 1072 aa16■□□□□ 0.15
USB1-211ENST00000565662 CABS1Q96KC9 395 aa16■□□□□ 0.15
USB1-211ENST00000565662 SMAD5Q99717 465 aaKnown RBP16■□□□□ 0.15
USB1-211ENST00000565662 HAUS8Q9BT25 410 aa16■□□□□ 0.15
USB1-211ENST00000565662 ATP13A2Q9NQ11 1180 aa16■□□□□ 0.15
USB1-211ENST00000565662 TMEM184CQ9NVA4 438 aa16■□□□□ 0.15
USB1-211ENST00000565662 CIDEBQ9UHD4 219 aa16■□□□□ 0.15
USB1-211ENST00000565662 TAC3Q9UHF0 121 aa16■□□□□ 0.15
USB1-211ENST00000565662 MED16Q9Y2X0 877 aa16■□□□□ 0.15
USB1-211ENST00000565662 TEX264Q9Y6I9 313 aa16■□□□□ 0.15
USB1-211ENST00000565662 ANKRD12Q6UB98 2062 aa15.99■□□□□ 0.15
USB1-211ENST00000565662 A0A0J9YVX5 310 aa15.99■□□□□ 0.15
USB1-211ENST00000565662 CTSVO60911 334 aa15.99■□□□□ 0.15
USB1-211ENST00000565662 ANXA5P08758 320 aa15.99■□□□□ 0.15
USB1-211ENST00000565662 FDXRP22570 491 aa15.99■□□□□ 0.15
USB1-211ENST00000565662 CUL1Q13616 776 aa15.99■□□□□ 0.15
USB1-211ENST00000565662 TSTA3Q13630 321 aaPredicted RBP15.99■□□□□ 0.15
USB1-211ENST00000565662 FAM53BQ14153 422 aa15.99■□□□□ 0.15
USB1-211ENST00000565662 MYBPC3Q14896 1274 aa15.99■□□□□ 0.15
USB1-211ENST00000565662 CCSMST1Q4G0I0 132 aa15.99■□□□□ 0.15
USB1-211ENST00000565662 PRAMEF13Q5VWM6 474 aa15.99■□□□□ 0.15
USB1-211ENST00000565662 CPZQ66K79 652 aa15.99■□□□□ 0.15
USB1-211ENST00000565662 ZNF425Q6IV72 752 aa15.99■□□□□ 0.15
USB1-211ENST00000565662 PAQR7Q86WK9 346 aa15.99■□□□□ 0.15
USB1-211ENST00000565662 VPS39Q96JC1 886 aa15.99■□□□□ 0.15
USB1-211ENST00000565662 TRIM56Q9BRZ2 755 aaKnown RBP15.99■□□□□ 0.15
USB1-211ENST00000565662 ACAT2Q9BWD1 397 aa15.99■□□□□ 0.15
USB1-211ENST00000565662 TRIM55Q9BYV6 548 aa15.99■□□□□ 0.15
USB1-211ENST00000565662 P4HTMQ9NXG6 502 aa15.99■□□□□ 0.15
USB1-211ENST00000565662 TSR3Q9UJK0 312 aaKnown RBP15.99■□□□□ 0.15
USB1-211ENST00000565662 HEATR5BQ9P2D3 2071 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 USP27XA6NNY8 438 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 E7ESA3 106 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 HCRTR1O43613 425 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 FBLP22087 321 aaKnown RBP15.98■□□□□ 0.15
USB1-211ENST00000565662 MCM3P25205 808 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 IMPA1P29218 277 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 ELK3P41970 407 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 ITGA8P53708 1063 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 FOXK1P85037 733 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 NFKB2Q00653 900 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 CAV1Q03135 178 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 MGAT5Q09328 741 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 DSG2Q14126 1118 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 FASTKQ14296 549 aaKnown RBP15.98■□□□□ 0.15
USB1-211ENST00000565662 NKG7Q16617 165 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 PRTGQ2VWP7 1150 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 TUBB8Q3ZCM7 444 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 CAPN13Q6MZZ7 669 aaPredicted RBP15.98■□□□□ 0.15
USB1-211ENST00000565662 SUSD1Q6UWL2 747 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 CYHR1Q6ZMK1 362 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 ADCK2Q7Z695 626 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 C17orf64Q86WR6 236 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 AGGF1Q8N302 714 aaeCLIP15.98■□□□□ 0.15
USB1-211ENST00000565662 GALNT16Q8N428 558 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 NKAPQ8N5F7 415 aaKnown RBP15.98■□□□□ 0.15
USB1-211ENST00000565662 CSNK1A1LQ8N752 337 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 PDLIM5Q96HC4 596 aaKnown RBP15.98■□□□□ 0.15
USB1-211ENST00000565662 SLC29A3Q9BZD2 475 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 DRC3Q9H069 523 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 RAB17Q9H0T7 212 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 POPDC3Q9HBV1 291 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 SLC6A20Q9NP91 592 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 MKKSQ9NPJ1 570 aaPredicted RBP15.98■□□□□ 0.15
USB1-211ENST00000565662 WHRNQ9P202 907 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 CDC23Q9UJX2 597 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 NOVA2Q9UNW9 492 aaKnown RBP15.98■□□□□ 0.15
USB1-211ENST00000565662 CHMP2BQ9UQN3 213 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 KLHL20Q9Y2M5 609 aa15.98■□□□□ 0.15
USB1-211ENST00000565662 IGLV3-12A0A075B6K2 115 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 KCNE1BA0A087WTH5 132 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 VSTM2BA6NLU5 285 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 TTI1O43156 1089 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 DNAJB5O75953 348 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 AHSGP02765 367 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 EIF2S1P05198 315 aaKnown RBP15.97■□□□□ 0.15
USB1-211ENST00000565662 GSTA2P09210 222 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 AVPR1BP47901 424 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 CD97P48960 835 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 TBPL1P62380 186 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 RBBP7Q16576 425 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 TEDDM1Q5T9Z0 273 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 DUPD1Q68J44 220 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 LCTLQ6UWM7 567 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 IGFL3Q6UXB1 125 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 PIWIL4Q7Z3Z4 852 aaKnown RBP15.97■□□□□ 0.15
USB1-211ENST00000565662 FAM20CQ8IXL6 584 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 FDCSPQ8NFU4 85 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 COL26A1Q96A83 441 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 PNPLA2Q96AD5 504 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 MIEF2Q96C03 454 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms