RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 SERPINB8P50452 374 aa15.07■□□□□ 0
USB1-208ENST00000563207 MLLT10P55197 1068 aa15.07■□□□□ 0
USB1-208ENST00000563207 ATP6V0D1P61421 351 aa15.07■□□□□ 0
USB1-208ENST00000563207 FOXK1P85037 733 aa15.07■□□□□ 0
USB1-208ENST00000563207 SRSF1Q07955 248 aaKnown RBP eCLIP15.07■□□□□ 0
USB1-208ENST00000563207 TMEM207Q6UWW9 146 aa15.07■□□□□ 0
USB1-208ENST00000563207 ZNF517Q6ZMY9 492 aaPredicted RBP15.07■□□□□ 0
USB1-208ENST00000563207 RAPH1Q70E73 1250 aa15.07■□□□□ 0
USB1-208ENST00000563207 UBE2R2Q712K3 238 aaPredicted RBP15.07■□□□□ 0
USB1-208ENST00000563207 PIWIL4Q7Z3Z4 852 aaKnown RBP15.07■□□□□ 0
USB1-208ENST00000563207 TDRPQ86YL5 185 aa15.07■□□□□ 0
USB1-208ENST00000563207 OR9A1PQ8NGU1 263 aa15.07■□□□□ 0
USB1-208ENST00000563207 HMGCLL1Q8TB92 370 aa15.07■□□□□ 0
USB1-208ENST00000563207 ISL2Q96A47 359 aa15.07■□□□□ 0
USB1-208ENST00000563207 SLC22A18Q96BI1 424 aa15.07■□□□□ 0
USB1-208ENST00000563207 UBXN10Q96LJ8 280 aa15.07■□□□□ 0
USB1-208ENST00000563207 FCRL4Q96PJ5 515 aa15.07■□□□□ 0
USB1-208ENST00000563207 TRAPPC9Q96Q05 1148 aa15.07■□□□□ 0
USB1-208ENST00000563207 TRIM54Q9BYV2 358 aa15.07■□□□□ 0
USB1-208ENST00000563207 CAB39LQ9H9S4 337 aa15.07■□□□□ 0
USB1-208ENST00000563207 FAM60AQ9NP50 221 aa15.07■□□□□ 0
USB1-208ENST00000563207 PSMC3IPQ9P2W1 217 aaPredicted RBP15.07■□□□□ 0
USB1-208ENST00000563207 PLAGL1Q9UM63 463 aa15.07■□□□□ 0
USB1-208ENST00000563207 ICKQ9UPZ9 632 aa15.07■□□□□ 0
USB1-208ENST00000563207 MAN2B2Q9Y2E5 1009 aa15.07■□□□□ 0
USB1-208ENST00000563207 ACOT9Q9Y305 439 aa15.07■□□□□ 0
USB1-208ENST00000563207 CCDC88CQ9P219 2028 aa15.07■□□□□ 0
USB1-208ENST00000563207 UTP20O75691 2785 aaKnown RBP15.06■□□□□ 0
USB1-208ENST00000563207 A0A087X1B8 175 aa15.06■□□□□ 0
USB1-208ENST00000563207 PABPN1LA6NDY0 278 aaKnown RBP15.06■□□□□ 0
USB1-208ENST00000563207 ARHGEF33A8MVX0 844 aa15.06■□□□□ 0
USB1-208ENST00000563207 TMEM150CB9EJG8 249 aa15.06■□□□□ 0
USB1-208ENST00000563207 CPNE3O75131 537 aaKnown RBP15.06■□□□□ 0
USB1-208ENST00000563207 SNRNP200O75643 2136 aaKnown RBP15.06■□□□□ 0
USB1-208ENST00000563207 MT-ND3P03897 115 aa15.06■□□□□ 0
USB1-208ENST00000563207 CAPN1P07384 714 aa15.06■□□□□ 0
USB1-208ENST00000563207 HIST1H2AGP0C0S8 130 aaPredicted RBP15.06■□□□□ 0
USB1-208ENST00000563207 CCDC166P0CW27 439 aa15.06■□□□□ 0
USB1-208ENST00000563207 HIST1H2ADP20671 130 aa15.06■□□□□ 0
USB1-208ENST00000563207 GCAP28676 217 aa15.06■□□□□ 0
USB1-208ENST00000563207 TYK2P29597 1187 aa15.06■□□□□ 0
USB1-208ENST00000563207 PKLRP30613 574 aa15.06■□□□□ 0
USB1-208ENST00000563207 AP1S2P56377 157 aa15.06■□□□□ 0
USB1-208ENST00000563207 FOXL2P58012 376 aa15.06■□□□□ 0
USB1-208ENST00000563207 GRB7Q14451 532 aa15.06■□□□□ 0
USB1-208ENST00000563207 NAA30Q147X3 362 aaPredicted RBP15.06■□□□□ 0
USB1-208ENST00000563207 ZIC1Q15915 447 aa15.06■□□□□ 0
USB1-208ENST00000563207 DEFB110Q30KQ9 67 aa15.06■□□□□ 0
USB1-208ENST00000563207 PTCHD3Q3KNS1 767 aa15.06■□□□□ 0
USB1-208ENST00000563207 TIFABQ6ZNK6 161 aa15.06■□□□□ 0
USB1-208ENST00000563207 CDHR3Q6ZTQ4 885 aa15.06■□□□□ 0
USB1-208ENST00000563207 ASB18Q6ZVZ8 466 aa15.06■□□□□ 0
USB1-208ENST00000563207 ADAMTSL2Q86TH1 951 aa15.06■□□□□ 0
USB1-208ENST00000563207 TBC1D1Q86TI0 1168 aaPredicted RBP15.06■□□□□ 0
USB1-208ENST00000563207 FAM20CQ8IXL6 584 aa15.06■□□□□ 0
USB1-208ENST00000563207 CABS1Q96KC9 395 aa15.06■□□□□ 0
USB1-208ENST00000563207 HIST1H2AHQ96KK5 128 aa15.06■□□□□ 0
USB1-208ENST00000563207 CCDC138Q96M89 665 aa15.06■□□□□ 0
USB1-208ENST00000563207 HIST1H2AJQ99878 128 aa15.06■□□□□ 0
USB1-208ENST00000563207 H2AFJQ9BTM1 129 aa15.06■□□□□ 0
USB1-208ENST00000563207 MENTQ9BUN1 341 aa15.06■□□□□ 0
USB1-208ENST00000563207 ROPN1BQ9BZX4 212 aaPredicted RBP15.06■□□□□ 0
USB1-208ENST00000563207 ROPN1Q9HAT0 212 aaPredicted RBP15.06■□□□□ 0
USB1-208ENST00000563207 C1GALT1Q9NS00 363 aa15.06■□□□□ 0
USB1-208ENST00000563207 SPHK1Q9NYA1 384 aa15.06■□□□□ 0
USB1-208ENST00000563207 CIDEBQ9UHD4 219 aa15.06■□□□□ 0
USB1-208ENST00000563207 ANAPC2Q9UJX6 822 aa15.06■□□□□ 0
USB1-208ENST00000563207 RUVBL2Q9Y230 463 aaKnown RBP15.06■□□□□ 0
USB1-208ENST00000563207 FARSAQ9Y285 508 aaKnown RBP15.06■□□□□ 0
USB1-208ENST00000563207 FER1L5A0AVI2 2057 aa15.05■□□□□ 0
USB1-208ENST00000563207 ARGFXA6NJG6 315 aa15.05■□□□□ -0
USB1-208ENST00000563207 C2orf74A8MZ97 194 aa15.05■□□□□ -0
USB1-208ENST00000563207 C21orf140B9A014 251 aa15.05■□□□□ -0
USB1-208ENST00000563207 MEN1O00255 615 aa15.05■□□□□ -0
USB1-208ENST00000563207 PHGDHO43175 533 aaKnown RBP15.05■□□□□ -0
USB1-208ENST00000563207 CTIFO43310 598 aaKnown RBP15.05■□□□□ -0
USB1-208ENST00000563207 CDH16O75309 829 aa15.05■□□□□ -0
USB1-208ENST00000563207 RFPL1O75677 317 aa15.05■□□□□ -0
USB1-208ENST00000563207 FKBP9O95302 570 aa15.05■□□□□ -0
USB1-208ENST00000563207 ALDOAP04075 364 aaKnown RBP15.05■□□□□ -0
USB1-208ENST00000563207 C2P06681 752 aa15.05■□□□□ -0
USB1-208ENST00000563207 SLC35E2BP0CK96 405 aa15.05■□□□□ -0
USB1-208ENST00000563207 ERGP11308 486 aa15.05■□□□□ -0
USB1-208ENST00000563207 RORAP35398 523 aa15.05■□□□□ -0
USB1-208ENST00000563207 MAGEA12P43365 314 aa15.05■□□□□ -0
USB1-208ENST00000563207 BMPR2Q13873 1038 aa15.05■□□□□ -0
USB1-208ENST00000563207 ZNF460Q14592 562 aa15.05■□□□□ -0
USB1-208ENST00000563207 KIR2DS3Q14952 304 aa15.05■□□□□ -0
USB1-208ENST00000563207 CYP2A13Q16696 494 aa15.05■□□□□ -0
USB1-208ENST00000563207 UGT8Q16880 541 aa15.05■□□□□ -0
USB1-208ENST00000563207 TMTC4Q5T4D3 741 aa15.05■□□□□ -0
USB1-208ENST00000563207 BPHLQ86WA6 291 aaPredicted RBP15.05■□□□□ -0
USB1-208ENST00000563207 DSELQ8IZU8 1212 aa15.05■□□□□ -0
USB1-208ENST00000563207 ENDOVQ8N8Q3 282 aaKnown RBP15.05■□□□□ -0
USB1-208ENST00000563207 OR2L8Q8NGY9 312 aa15.05■□□□□ -0
USB1-208ENST00000563207 FLVCR1-AS1Q8TAF5 88 aa15.05■□□□□ -0
USB1-208ENST00000563207 ANKRD49Q8WVL7 239 aa15.05■□□□□ -0
USB1-208ENST00000563207 PITPNM3Q9BZ71 974 aa15.05■□□□□ -0
USB1-208ENST00000563207 NMRAL1Q9HBL8 299 aa15.05■□□□□ -0
USB1-208ENST00000563207 SNX15Q9NRS6 342 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms